| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0645 |
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| Symbol | |
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| ID | 5453216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 710404 |
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| End bp | 711708 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874386 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001410157 |
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| Protein GI | 154249332 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.196271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAG GATTGAGAGA TAAATTATCA AACGCGTTTA AAGTTCTTTC TGGAAAAGGA
AAAATCACTG AGAGGAATAT AGAAGAGGCT ATACAGATAG TAAAGACTGC TTTATTAGCA
GCAGATGTTA ACTATAAAGT TGTCAAAGAG TTTGTTGAAA ATGTAAAGAA GAGAGCTTTG
GGAGAAGAAG TACTCAAATC GTTAACCCCA GACCAGATGT TTGTAAAGAT AATTAGGGAT
GAATTGATAA AACTTCTTGG GGAACGCGAA CCATTTAAAT TAATTCATAG GCCCGCGTAT
ATAATGATGG TTGGTTTACA AGGTACAGGT AAGACTACCA GTGCAGCTAA AATCGCTAAT
TATTTGAAAA AACAAGGTAA AAATCCTATA CTCGTTGCCG CAGATACTTA TCGTCCAGCC
GCTATAGATC AACTTGAAAC GTTAGGTAAA AAGATAGGTG TGCCAGTAAT CACAGGCGAT
AGAAAAAATG CTTTAAAAAT AGTAGAGGAA GCAAAGAAAC AAGTTAAAGA TAGCGGTCAT
GATGTCGTTA TCTTAGATAC CGCTGGGCGA TTGCACATTG ATGATGAGAT GATGCAAGAA
TTAGAACAAA TAAAGGAAAT GGTGAATCCT GACGAAATTT TGCTCACAGT CGACGCAATG
GCTGGCCAAG ACGCTGTTAA TTCGGGTAAG ACTTTTAACG ATAGATTAAA TGTGACGGGT
TTTGTAATAA CAAAATTAGA TGGTGACTCA CGTGGTGGAG TTATATTAAC AATTCGATAT
ATAACGGGTA AACCTGTAAA ATTTGTCGGC GTTGGTGAAA AGATAGACGA CTTTGATGAA
TTTTATCCAG ATAGAATTGC AAGTAGAATC CTTGGACTTG GCGATATGCT CTCACTAATT
GAAAAAGTTG AACGTGAACT TGATAAAGAA AAGATGGAAA AGATGAGTCA GAAATTCATG
AGAGCTGAGT TCACATTAGA AGATTTCAGA GAACAAATTA AAGAGATTAA AAAGCTTGGA
ATAGATAAAA TTCTTGAAGC ATTACCCGGT TCTCCACAAG TTGATTTAGA TACAAGCGAA
AAAGAACTTA AGCGAATTGA GGCCATAATA AACTCAATGA CACCAGAAGA AAGAAACAAT
CCGGATATTA TAAACGCAAG TAGGAAGAAA CGAATAGCCG CCGGAAGTGG AACAACAGTC
CAAGATATCA ATAAGCTTCT CAAATCTTAC GAGGAAATGA AAAAACTTAT GAAAACAATG
AAAAAAGGAA AAATGCCATT TGCTCTTAAA GGATTTAAAT TCTGA
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| Protein sequence | MFEGLRDKLS NAFKVLSGKG KITERNIEEA IQIVKTALLA ADVNYKVVKE FVENVKKRAL
GEEVLKSLTP DQMFVKIIRD ELIKLLGERE PFKLIHRPAY IMMVGLQGTG KTTSAAKIAN
YLKKQGKNPI LVAADTYRPA AIDQLETLGK KIGVPVITGD RKNALKIVEE AKKQVKDSGH
DVVILDTAGR LHIDDEMMQE LEQIKEMVNP DEILLTVDAM AGQDAVNSGK TFNDRLNVTG
FVITKLDGDS RGGVILTIRY ITGKPVKFVG VGEKIDDFDE FYPDRIASRI LGLGDMLSLI
EKVERELDKE KMEKMSQKFM RAEFTLEDFR EQIKEIKKLG IDKILEALPG SPQVDLDTSE
KELKRIEAII NSMTPEERNN PDIINASRKK RIAAGSGTTV QDINKLLKSY EEMKKLMKTM
KKGKMPFALK GFKF
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