Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0627 |
Symbol | |
ID | 5453008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 692022 |
End bp | 692906 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874368 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001410139 |
Protein GI | 154249314 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000558297 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TTAAGAAAAA ATGGTGGATA CCTTACGCTT TTTTAGCTTT GCCGATTACT TTTTACATTA TTTGGGTTAT CATTCCAATT TTCCAAACTT TTATATATAG CTTCACAGAT TGGGATAGTA TATCTCCAAC ATTTAATTTC GTTGGATTTC AAAATTACAA AGACCTTTTC CAAGATTATT ACTTTTTACT CTCTTTGAAA AATAATTTCT ACTGGATGAT AGGATTTGTA TTTATCTCTA TCCCTCTTGG TCTCGGATTT GCTATGCTTA TGGATCAAAA ATTCCCCGGG CACAAAGTTT ATAAGTCTCT TGTTTATTTA CCGATGACTC TCTCTTTCGT TGTTATTGGT CAAATCTGGT CTTGGATTTT AGAACCACGA AATGGTGCGT TAAATACATT CTTGAGAGCT ATCGGCCTTT CCAATTTAGC AAGGCCGTGG ATTAGTGACC CGAATATAGT GACGTTTTCT CTAATAGCCG CGGCACTTTG GAGACAAGTT GCTTACGCAA TGATTCTTTT CTTGGCAGGT TTACAAGGAG TTTCCAAAGA GCATGTTGAA GCAGCTTACG TTGATGGGGC AAATTCGTTC CAAAGATTTT GGCATGTTAT ACTTCCTGAG TTAAGGCCTG CGACTGTTAT AGCGATTACG GTGAATATAA TAGACTCTTT GAGAGCATTC GATATAGTTT TTGTAATGAC TCGTGGAGGT CCGTTCTATT CTTCAAGTGT TATGGCTAAT TATATGTACA TAAAAGCGTT TCATAATTAC AATATGGGAT ACGGTTCCGC TATAGCTGTT ATACAATTTT TGATAACTCT TGTGTTTATA ATAGCTTATC TCAACAATGT TCTTAAGAAG GAGGAAAGGG AATGA
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Protein sequence | MNKFKKKWWI PYAFLALPIT FYIIWVIIPI FQTFIYSFTD WDSISPTFNF VGFQNYKDLF QDYYFLLSLK NNFYWMIGFV FISIPLGLGF AMLMDQKFPG HKVYKSLVYL PMTLSFVVIG QIWSWILEPR NGALNTFLRA IGLSNLARPW ISDPNIVTFS LIAAALWRQV AYAMILFLAG LQGVSKEHVE AAYVDGANSF QRFWHVILPE LRPATVIAIT VNIIDSLRAF DIVFVMTRGG PFYSSSVMAN YMYIKAFHNY NMGYGSAIAV IQFLITLVFI IAYLNNVLKK EERE
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