Gene Fnod_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0612 
Symbol 
ID5452545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp680010 
End bp680981 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content42% 
IMG OID640874353 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_001410124 
Protein GI154249299 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID[TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.94328e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA GAGTTTGTGA GCTTTTAGGT ATAAAGTACC CGATAATAAT GGGAGGAATG 
TCTTGGGCAG GCACACCCAA ACTTGCCGCA GCCGTCTCAA ACGCGGGTGG ACTTGGCATC
ATCGGTTCTG GTGCGATGAA GGGCGAGCAT TTGAAAAAGG CGATTGATGA AATTCGACAA
CTCACAGATA AGCCGTTCGG TGTAAATATA ATACTAGTGT CCCCTTATGC GGATGAGCTT
GTGGATTTAG TAATTCAAGA ACGCGTACCA GTTGTAACGT TCGGTGCGGG TAATCCTTCA
AAATACATTG CTAAGTTAAA AGAAATCGGT ACGAAAGTGA TACCGGTAGT TGCTTCAGAC
AATATGGCGA AGATGATGGA GCGAATAGGA GCAGATGCGG TCATAGCCGA AGGTATGGAA
TCTGGAGGGC ACATAGGTGA GGTAACAACA CTTGTCCTTG TTAACGCAGT ATGCAGAAGC
GTAAGTATCC CTGTTATCGC AGCAGGTGGA ATAGCGGACG GGAAGGCTAT GGCAGCCATG
TTCGCTTTAG GTGCGGAAGG TATCCAAATG GGTACAAGAT TTATAGCTAC TTACGAAGCT
GATACACACG AAAACTTCAA AAAATTAATT GTAAAATCCG GTATCAGAGA TACCGTTGTA
ACTGGTGCAA CTTTAGGTCA TCCTGCAAGA GTAATCGAAA CGAGATTTGC AAAGAAAGTA
AGAGAATTGG AGGTTGAAAA TCTCCAGGAA GCAGAGGAAG TTCTTGTCGG TAGTTTACGT
AAAGCGGTTG TTGATGGTAA TATAGACGAA GGTTCATTCA TGGCTGGTCA GTGCGTTGGA
TTAATTAACG AAATTAAACA CGTTGACGAG GTTATACAAG ACATAATGAG AGAATTCACA
CAAACTCTGG AAAAGTTGAA TAACGTAAGA ATGGAGATTT ACAACGATTT GGAATTGACT
TACAGTAAGT AA
 
Protein sequence
MKNRVCELLG IKYPIIMGGM SWAGTPKLAA AVSNAGGLGI IGSGAMKGEH LKKAIDEIRQ 
LTDKPFGVNI ILVSPYADEL VDLVIQERVP VVTFGAGNPS KYIAKLKEIG TKVIPVVASD
NMAKMMERIG ADAVIAEGME SGGHIGEVTT LVLVNAVCRS VSIPVIAAGG IADGKAMAAM
FALGAEGIQM GTRFIATYEA DTHENFKKLI VKSGIRDTVV TGATLGHPAR VIETRFAKKV
RELEVENLQE AEEVLVGSLR KAVVDGNIDE GSFMAGQCVG LINEIKHVDE VIQDIMREFT
QTLEKLNNVR MEIYNDLELT YSK