Gene Fnod_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0543 
Symbol 
ID5452032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp599492 
End bp601072 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content39% 
IMG OID640874292 
Productphytoene dehydrogenase and related protein-like protein 
Protein accessionYP_001410063 
Protein GI154249238 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.16233e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA AAGTTAAAAA AGTTGTAGTT GTAGGTGTGG GAGTAGCCGG TTTAACGGCT 
AGTTTGTATT TGCTTTTGGA AGGACACGAT GTCACACTTA TAGAGAAGAA CAATTACTGC
GGTGGGTTGG TGAATTCGTT TAATAGAGCG GATTTTATCT TCGATGGTGG TGTCCCAGCG
TTTTTGAATG CTGGGATAAT TTTGCCTATG CTCAATGAAG TGGGAATTGA TTTAAAGTTT
GTTAAAAACA AAGTTTCCGT TGGTATAGGC GACAAAATTG TGCACGTGAA GGGCGAGGAA
AGTTTTAGGG ATTACGTAGA TATGCTAAAA GAGATTTATC CGGATAGTGT GGAAGATATA
GAGAGATTGG CGTTGGTTAT TTTGAGCGTT ATGAACAGTA TGAAGATTTT GTATAGCGTC
GATAATCCAC TCTTTGTAGA GAAGAAAGAA TTTAAGACTT TTAAGACTTA TCTGCCCTGG
CTTTTGAAAG TTCTAAAGAC CGTGTCGGTT ATGAACAAGC TCAAAGAGCC TGTTGAGGAT
TATGTAGGAA AGATTGTGCG AAACGAATCT CTTAAAGATA TACTTACTCA GCATTTTTTC
AAAAATACAC CCGCGTTTTT CGCATTGAGT TATTTTTACG CATACACGGA TTACATCTAC
CCTGAGAACG GTATCGGTGA ATTGGCATGG AAGATGGAAG AGAAGGTAAG GGAACTTGGT
GGTGAGATTG TATTAAATAC GGGGATTAAA AAGGTAGATG TTGACAAGCA TTTGGTTCTA
GACGGTGATG GAAGGAGTTG GAGATACGAT AAATTAATCT GGGCAGCTGA TTTGAAGCGG
TTGTATAGTA TAGCTTGTTG TGATAGAAAA AGTGAAAAAG TTGAGAAAGA AAAGAATAAA
GTGCTATCTG GGAAGACCAC TGAATCAGTT GTGAAGGTGT TTATTGCTGT TGATGAACCG
GTTGAGTATT TTGAAAAGAT ATCAAACGAG CATTTCTTTT ACACACCAAG CAAAGAAGGG
ATAGGCGAAA TTGAACATTC CGAGCTTGAG AATTTGAAAA GCGCTATTAG AAATGATTTT
AACAATTTCG ATAGAAACGC AATTAGCGAA TGGATTGGTA AGCTTTGTAA ATACACTTCG
TACGAGATAT CTATACCTGC TTTAAGAAAC AAAAATTTAG CTCCGGAAGG TAAGACTGGT
TTGATAGTCA ATTTCTTTTT CGATTACGAA CTTGCGAAGC TGGTCCATGA TGCAGGTTGG
TACGCTGAGT TAAAAAACAT GATTGAAGAG AATGTAATTG AAACATTATC AAATACAGTC
TATCCAGAGC TGAAGGATAA AGTGATTTTT AAATTCTCTT CGACCCCCTT AACGATAGCA
AGGTATGTAG GTACAACAAA TGGTGCGATT GTTGGTTGGG CGTTTGGCAA ACTTGGAGAA
AAACAGCCTA TAAAGAATAG TTTGTCGCAT GCGTATTTGA CTGCGTTTCC GGATATATAC
AAAGCAGGTC AGTGGGCGTA CAGTCCAGCC GGCGTTCCGA TGGCTGTCTT GACTGGTAAA
CTAGCCGCCG GGAAGGTTTG A
 
Protein sequence
MKKKVKKVVV VGVGVAGLTA SLYLLLEGHD VTLIEKNNYC GGLVNSFNRA DFIFDGGVPA 
FLNAGIILPM LNEVGIDLKF VKNKVSVGIG DKIVHVKGEE SFRDYVDMLK EIYPDSVEDI
ERLALVILSV MNSMKILYSV DNPLFVEKKE FKTFKTYLPW LLKVLKTVSV MNKLKEPVED
YVGKIVRNES LKDILTQHFF KNTPAFFALS YFYAYTDYIY PENGIGELAW KMEEKVRELG
GEIVLNTGIK KVDVDKHLVL DGDGRSWRYD KLIWAADLKR LYSIACCDRK SEKVEKEKNK
VLSGKTTESV VKVFIAVDEP VEYFEKISNE HFFYTPSKEG IGEIEHSELE NLKSAIRNDF
NNFDRNAISE WIGKLCKYTS YEISIPALRN KNLAPEGKTG LIVNFFFDYE LAKLVHDAGW
YAELKNMIEE NVIETLSNTV YPELKDKVIF KFSSTPLTIA RYVGTTNGAI VGWAFGKLGE
KQPIKNSLSH AYLTAFPDIY KAGQWAYSPA GVPMAVLTGK LAAGKV