Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0542 |
Symbol | |
ID | 5452701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 598320 |
End bp | 599270 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874291 |
Product | hypothetical protein |
Protein accession | YP_001410062 |
Protein GI | 154249237 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000369435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAGAGG ATGTTAAGTA CGTTTTGTTG ATTACGTTGT TTATTGTTTT GCTAGGTTTG GTCGGTTTTT TTGTGGAGTA TGGACCGTTG AAGGTTGTTA TTGTGTTTTT CGAAGTTGTG TTAGTTGGGT ATGTGTTTAA GTACTATACG AAGAAAATTG CTGGTTTTAT TGTTTTGGCT ATTATTTTCT TTCTGATACC GATGGCGAAT TTTTACATGT TCAGCTATCT TGTTAAAACG GAGAGTAGCT TTACTTCAAC GCTTACGGAG TATATCCAAA ATATTTTTGG CTCGAGTTCA GAGGGTATGA TTTACCATCC AGATAAATCT TTAGAAGCAA AACAAAATGT TGTCATTGAT ATTCAAGGTA AGGCTGAAGT TGAGTTTGTC GAAGGCAATC AGATAGAGTA TCCAAGCGTG CTAAAAGTTG ACGTTAGTGA AAATTCTGTG AAGATATTCG GTGGGAAGAA GAATTCAAGG TATTTGATTA AAATTGGAAA AGACAATTTG AAAGTTTTTG AAGCTTCAGC CGTTGGAGTG GAGCTTTCAG GTAAGGTTGA GCTAGATGAT TTGAAGGTTG ATAGTGTGTC TGTAAAGGTG GAAGGTGAGA TATCGGCAAA TGGTATGGAA TTTGATGGTA CAGGTGTTGA GTTGAAAGGT ACGTTTAAAG CTGAAAAGAT AAATTGCAAC AGCGTTGGTA TTGATTTTAG TGGAATTTTC GATGTCCGTT ACATTGAACT TGAAGGTGTT GGGATAAATT TGGATATGAA GCTGAGTAAC TGTAAAAAGT TCACGGTTTC TGGAACGGGT GTGAATGGCA AGGTTGAATA CCTTGGAAAA GAAAAAATGG ATATGGAACT AAATGCGGTC GGTGGTACTG TTACGTTGAA AAATTTATCG GATGTTGATA TAAACATCCA AAGTAGTGGA GTTAAGGTCG TGAGACAATG A
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Protein sequence | MREDVKYVLL ITLFIVLLGL VGFFVEYGPL KVVIVFFEVV LVGYVFKYYT KKIAGFIVLA IIFFLIPMAN FYMFSYLVKT ESSFTSTLTE YIQNIFGSSS EGMIYHPDKS LEAKQNVVID IQGKAEVEFV EGNQIEYPSV LKVDVSENSV KIFGGKKNSR YLIKIGKDNL KVFEASAVGV ELSGKVELDD LKVDSVSVKV EGEISANGME FDGTGVELKG TFKAEKINCN SVGIDFSGIF DVRYIELEGV GINLDMKLSN CKKFTVSGTG VNGKVEYLGK EKMDMELNAV GGTVTLKNLS DVDINIQSSG VKVVRQ
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