Gene Fnod_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0531 
Symbol 
ID5452651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp586288 
End bp587448 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content39% 
IMG OID640874280 
Productextracellular ligand-binding receptor 
Protein accessionYP_001410051 
Protein GI154249226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.67349e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGT TACTGAGTGT TTTGTTGTTC TTAGGTTTGT TTGTGAGTAT ATTTGCAGAG 
GTTGGAGTTT ACAACGATAA GGTGGTTATT GGAACATTTC AAGCATTATC AGGTCCTTAT
GCAGTTATCG GTCAAGAAAT GACAAAAGGT ATGAAAGCTT ACTTCAATTG GGTTAACAAC
CGTGGCGGAG TTTACGGAAG AAAGATTGAA CTCATAGTCG CTGATGATCA GCTTAATCCC
GCGAAGACAG TTGTTGAAGT AAAAAGACTT GTTGAGCAAG ATAAGGTTTT TGCCATAGTT
GGTGGGCTCG GTACCTATGG TTGTCTTGCC GTTATGGATT ATCTTGAACA AAACAAAGTA
CCGTTCGTTT ACCAAGGTGC GGGTACATCA AAGCTTGTTG TTCCTCCAAA AAGATATATA
TTCGGTGTGC AACCAGACTA CACACTTGAA GGTACACTCA TCGCAAAGTA CGTCGGAGAA
ATTGCTAAGT TCAAATCACC AGCTATTGTT TACATGAACA ACGATATTGG TTTAGAAGGA
TACACTGCAT TTAAAGGTAA ACTCAGTGAT TACAAAATGT CACCAGTTGT GGAAATTTCC
TACAACCCGG CGGATACAGA TTACAGTGGT TTAGTTGTAA AATTAGTCGA GAAGAATCCA
GATGTTGTAA TTATCTACGG ACTTATAACT GATACAATCA GATGGATTAA GACAATAAGA
GATTACGGTC TTAACAGTAA GATTATAACG ATTTATCCTA ATGCTGATCC ATCATTCATT
AGCCTTGCTG GAAATTACGC TGAAGGTGTT ATCTTCACAG GATGGGTCCC ACTCGCAACA
CCAGATAGAC CTGATTTCGT TAGGGATTAT CAGAGGGCTA TTTCCATATT CCAAATTACT
TATCCAAAGC AAATTCCATC TTCATACGCT GTTGCTGGTT TTATAGCAGC TGAGGTATTT
ACAGAAGGAC TTGTCAGAGC TGGTAAGAAT CTTACAAGAG AAGGACTTGT AAAAGCACTT
GAGAGTTTCA AGAATTGGAA TGGAATTCTT GCAAAGGATA TAACATGGGG ACCAAATCTA
AGACGCGGTA AGTCATCGAT GTACCTCATG GTTGTTAAAA ACAAACAGTT TGTTCCACTA
ACAGATTTAA TAAGGCCATA A
 
Protein sequence
MRKLLSVLLF LGLFVSIFAE VGVYNDKVVI GTFQALSGPY AVIGQEMTKG MKAYFNWVNN 
RGGVYGRKIE LIVADDQLNP AKTVVEVKRL VEQDKVFAIV GGLGTYGCLA VMDYLEQNKV
PFVYQGAGTS KLVVPPKRYI FGVQPDYTLE GTLIAKYVGE IAKFKSPAIV YMNNDIGLEG
YTAFKGKLSD YKMSPVVEIS YNPADTDYSG LVVKLVEKNP DVVIIYGLIT DTIRWIKTIR
DYGLNSKIIT IYPNADPSFI SLAGNYAEGV IFTGWVPLAT PDRPDFVRDY QRAISIFQIT
YPKQIPSSYA VAGFIAAEVF TEGLVRAGKN LTREGLVKAL ESFKNWNGIL AKDITWGPNL
RRGKSSMYLM VVKNKQFVPL TDLIRP