| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0522 |
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| Symbol | |
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| ID | 5453241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 576953 |
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| End bp | 578338 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874271 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001410042 |
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| Protein GI | 154249217 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAAACT TGCTCAAAAA TATATTGAAA ATAGCAATTC CGGTGTCGTT GGAAAATATT
ATCGCTAATA CGGGAACTTT TATTTTGACC ATTTTGCTCT CTCAACTTGG TGAAGTTGAG
GTTGCGATAA ATGGCGTAGC TAACCAAGGC AGCTTCTTGG TTATATTGTT CTTATTTGGT
CTAAATACCG GCGGAGCGAT TTTTCTTGCG CAGTATTGGG GAAAGAAAGA TACGGAAAAC
ATCAAAAAGA TAATGAGTTT GATGATATAC TTTTCATTAC TGATTTCACT CGCTTTTTTC
GTATTGACTT TCTTCTTCCC AAAGGTGTTT ATAAAAATGT TTTCCAATGA TACGCGGGTG
ATTGATAGAG GAATACTTTA TCTAAGATTA ATTTCTATTT CTTATTTCGG ACTTGCTCTG
GAAATATCTT TCAGGACACT CCTCAGGTCG ATAGAAAGAG CTACAATCCC AATGATGTCG
TATGTTTACG GTACCATTAT TCAGATATTT TTAGCGTATG GTTTTGTTAA AGGACTTTTC
GGTTTGCCAA AACTTGGACT TGTTGGTATC GCAATCTCTC TTATAGTCTC AAGATTTGTT
ATACCACTTT ATCAAATTCT TAGGGCATCT ACTTTGAAAC TTCCGTACAC GTTTTCTCTT
AGTGGAATAT CTCGGAATAT GCTAAGTAAA TTTTTAGAAT TCGCAACGCC GACAACGTTG
AACGAGATAG CGTGGTCTCT TGGGATGACC GTTTACGGTA TAATATTCGG TAGGATGGGT
ACTCAAGCTT ATGCGGCAAG AAATATACTT TCTTCATTTG AAAATTACGT TTGGACGTTC
ACATTCGGTA TCGTTATAGC GGCTTCTGTA ATTATTGGTA AGTACATAGG ACAGATGGAA
TACGAAAAGG CACAGCAGTT TGCTAAAAAG ATTTTAATGT GGAGTTTTGT AATTGGTTTA
CTTTCAGCGG TTATAGTGAT GGTTGTTTAC TACATTCTCT ATCCAACTTT CAAAATAGAA
GAAAATACTA AGAAGATATT GACTTACGCT ATGTGGGTAA TGCTTATCGG TGCGCCGGTG
AAAGCATTCA ATGGAGCAGC GATTGTTGGA GTGCTACGCG CTGGTGGTGA TGCCAAATTT
GCGTTCTTAC TTGAAACATT CACACTCTGG TGTTTGGGTG TGCCTCTTGC CTTTATCGGA
GCGTTCATTT GGAAACAGCC ACTTCCAGTT GTGTATGCGT TAACTCTAAG TGATGAAGTT
GTCAAATCGG TAATTGCATA CATTAGAATA AAGTCTAAAA AATGGATTAA GAATGTGACT
ATCTCACCTG AGATATCAAG TGCGCCTGCT GCTTCAGCTG TTCCAGGGAT TGGCGAGGAG
CATTGA
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| Protein sequence | MINLLKNILK IAIPVSLENI IANTGTFILT ILLSQLGEVE VAINGVANQG SFLVILFLFG
LNTGGAIFLA QYWGKKDTEN IKKIMSLMIY FSLLISLAFF VLTFFFPKVF IKMFSNDTRV
IDRGILYLRL ISISYFGLAL EISFRTLLRS IERATIPMMS YVYGTIIQIF LAYGFVKGLF
GLPKLGLVGI AISLIVSRFV IPLYQILRAS TLKLPYTFSL SGISRNMLSK FLEFATPTTL
NEIAWSLGMT VYGIIFGRMG TQAYAARNIL SSFENYVWTF TFGIVIAASV IIGKYIGQME
YEKAQQFAKK ILMWSFVIGL LSAVIVMVVY YILYPTFKIE ENTKKILTYA MWVMLIGAPV
KAFNGAAIVG VLRAGGDAKF AFLLETFTLW CLGVPLAFIG AFIWKQPLPV VYALTLSDEV
VKSVIAYIRI KSKKWIKNVT ISPEISSAPA ASAVPGIGEE H
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