Gene Fnod_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0434 
SymbolrplM 
ID5453191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp474743 
End bp475186 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content38% 
IMG OID640874184 
Product50S ribosomal protein L13 
Protein accessionYP_001409956 
Protein GI154249131 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0288817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGC CATTTCCTGT ACAAAAGACT TCGTTTCCAA AAGTAGAAAG AAAATGGTAC 
CTTGTGGACG CAGCTGGCAA GCCACTTGGA CGTTTAGCTA CAAGAATAGC ATTACTTTTA
CAAGGAAAAA ATGAACCAAC ATGGGCACCA CATGTTGATA ACGGTAATTT TGTCGTTGTT
ATAAACGCTG AAAAGGTATT ACTCACAGGT AAAAAACTTA ATCAAAAAGT TTACTATCAC
CACTCAGGTT ATCCTGGTGG ATTAAAATCA CAAACTGCAA GACAAATAAT GGAAAAATAT
CCAGAAAGAA TTATCGAACT TGCAGTTAAG AGGATGCTTC CAAAAACGGT ACTTGGGAAA
CACCAATTTA AGAGACTTAA AGTTTACGCT GGCGAAAATC ATCCACATGC TGCTCAAAAG
CCAGAAAAAG TTGAGCTTCT CTAA
 
Protein sequence
MARPFPVQKT SFPKVERKWY LVDAAGKPLG RLATRIALLL QGKNEPTWAP HVDNGNFVVV 
INAEKVLLTG KKLNQKVYYH HSGYPGGLKS QTARQIMEKY PERIIELAVK RMLPKTVLGK
HQFKRLKVYA GENHPHAAQK PEKVELL