Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0434 |
Symbol | rplM |
ID | 5453191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 474743 |
End bp | 475186 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874184 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_001409956 |
Protein GI | 154249131 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0288817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAGGC CATTTCCTGT ACAAAAGACT TCGTTTCCAA AAGTAGAAAG AAAATGGTAC CTTGTGGACG CAGCTGGCAA GCCACTTGGA CGTTTAGCTA CAAGAATAGC ATTACTTTTA CAAGGAAAAA ATGAACCAAC ATGGGCACCA CATGTTGATA ACGGTAATTT TGTCGTTGTT ATAAACGCTG AAAAGGTATT ACTCACAGGT AAAAAACTTA ATCAAAAAGT TTACTATCAC CACTCAGGTT ATCCTGGTGG ATTAAAATCA CAAACTGCAA GACAAATAAT GGAAAAATAT CCAGAAAGAA TTATCGAACT TGCAGTTAAG AGGATGCTTC CAAAAACGGT ACTTGGGAAA CACCAATTTA AGAGACTTAA AGTTTACGCT GGCGAAAATC ATCCACATGC TGCTCAAAAG CCAGAAAAAG TTGAGCTTCT CTAA
|
Protein sequence | MARPFPVQKT SFPKVERKWY LVDAAGKPLG RLATRIALLL QGKNEPTWAP HVDNGNFVVV INAEKVLLTG KKLNQKVYYH HSGYPGGLKS QTARQIMEKY PERIIELAVK RMLPKTVLGK HQFKRLKVYA GENHPHAAQK PEKVELL
|
| |