| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0431 |
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| Symbol | |
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| ID | 5452174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 471275 |
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| End bp | 472393 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874181 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001409953 |
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| Protein GI | 154249128 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTAAAA CTGTTATTAA GGAGAACGAA GAGTTACAAA AGAAACTTGA AAAATTAGTA
GAACTTGGCA AAAGGAAGGG GTATATTACA TACGATGATA TCGATAGGAC ATTTCCACCA
GGTGATGCTG ACTCACTTGA TAGCAACTTT TTGGATATGG TATACGAGAC CCTCGAAAAG
AACAAAATAG AAATTAGAGA TACAACGGAT CTTATGAACA TAGAGGAAGA AGTTAAAGCT
TATCTTTCAG AAAGCCCAGA AATATTCAAC AGCACAGAAC CAAAAGATTT AATAAAAATG
TATCTCAGGG ATATAGGTAA AATAAGGCTT TTAACACCAT CTGAAGAAAA AAGGCTTGCT
CAACGTGCAC AGATGGGAGA TCAAAGAGCC AAAGAAGAAC TAATAATATC AAACCTTAGA
CTTGTTGTAA GCATGGCGAA AAGATATCTT GGAAAGGGTT TGTCTTTCTT GGACCTTATC
CAAGAAGGTA GCCTTGGGCT GATAAAAGCG GTTGAAAAAT TCGATTGGTC CAAAGGGTAC
AAGTTTTCAA CTTATGCAAC ATGGTGGATA AGGCAAGCTA TTACTAGGGC TATAGCAGAC
CAGGCAAGAA CGATAAGGGT ACCTGTACAT ATGGTTGAAA CCATAAACAA GATACAGAAA
ATAAAGCGCG AATATGTTCA AGAACATGGT GAGGAACCAT CGATTGAATA TATCGCCGAA
CAAGTTGGAA AGCCCGTAGA CAAAATCGAG GAAATATTGC AAGCAGCTCC CGAGACACTC
TCCTTAGAAA CACCTGTTAA TGAAGAAGAT GACTCTTCAA TGGGAGATTT CATTGCGGAC
GAAAGCATAG GTTCACCCAA AAAAGAAGCA ATTAGAACAC TTATGAGAGA AGAAATAGAT
AAATTACTTG AAACTCTTAA TGATCGTGAG AAAAAAGTAT TAAAAATGAG ATACGGGCTA
TACAATGGTA AGCCTATGAC CCTGGAAGAA GTTGGTCAAT TTTTTGGTGT TACAAGGGAA
AGAATCAGAC AAATAGAAGT CAAAGCACTC AGAAAATTGA GACATCCATC AAGAAGCAGA
TATTTAAGAT TGCTGCAAAA ATTAACAGAG GAAGATTGA
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| Protein sequence | MSKTVIKENE ELQKKLEKLV ELGKRKGYIT YDDIDRTFPP GDADSLDSNF LDMVYETLEK
NKIEIRDTTD LMNIEEEVKA YLSESPEIFN STEPKDLIKM YLRDIGKIRL LTPSEEKRLA
QRAQMGDQRA KEELIISNLR LVVSMAKRYL GKGLSFLDLI QEGSLGLIKA VEKFDWSKGY
KFSTYATWWI RQAITRAIAD QARTIRVPVH MVETINKIQK IKREYVQEHG EEPSIEYIAE
QVGKPVDKIE EILQAAPETL SLETPVNEED DSSMGDFIAD ESIGSPKKEA IRTLMREEID
KLLETLNDRE KKVLKMRYGL YNGKPMTLEE VGQFFGVTRE RIRQIEVKAL RKLRHPSRSR
YLRLLQKLTE ED
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