| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0396 |
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| Symbol | |
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| ID | 5453144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 430616 |
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| End bp | 432784 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874145 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001409918 |
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| Protein GI | 154249093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0626826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT TGAGAAAATT GTTCATTTAC ATACTACTTA TCTTTGGTAC AGTTGTGATG
ATAGCCCCAT TTGCTTGGAT GCTTGTAACA TCTTTTAAAT TACCATCCGA AGTAAATTCA
TGGCCACCAA GGTGGTCAAC GAAATCTTTC TCCACACAAC GTGATGTTAA AGTCGTTCCA
TCAACAGGGA CAACATCATC TGTAAAAGGT CTCAGTTTAA GAGAAGCTTT AACATTTGTT
GCTAAAAAGA CTCAAGGACT TGTACTCGTC GTCAATGATG ATCCATTTTA CAGAGGTACA
TTAACAATTC CTTTCAAAGG TAGTACATAC ACTTTAAGTC TTAATCAAGA AGAATACAAA
CAATTTTTAC AATCTTTAAA AATACCTTCT GATTTTTCAA TCGATGATGA AATTGAAAAC
AATCCTGAAG GCTTTTTTGA AAAAGTGCTT CTCAACTACA TCTACGGCGC GACACCTGTT
TTTAAAAGAA CGGATTTTAT AGAGAGGCTT TCTGGCAACG TAGAAACATT GCTAAATGGT
ATAGATACAA TGCTTACTTT TGGTATTGAT AGAATCCAAG ATGAAAACGA AAAAGAAAAA
TTTGCCAACT TCTTGGAAAA GAAAATGAAA GAATTACAAG AATTAAGTAC AAAAATACAA
AAGTACAAAG CTGGAAATGA GGTTATTTTG ACAATTGATG AATTAAAAGA AATTAGAAAT
ATCATATCCA ATTATAACTT AGTTTACGAA AATTCAAACG AATTATCTGA AAACTACAAT
AACGCTCTTC AGAATTCTCT ATTGAATTAC TTAGACAATA TAAATTTCTT CTTAAGCACA
TACGATTATT TTGTGAAAAT CCAAGACAAA AAAGTTGATG AAAATATCGT TGCTCAACCA
ATGACAGAAG AAGAACGAAA AGCTTTACTC CTTGAAAAAA TAAAAGACTT AGAAGATTTT
GAGGATATTA AATCTTTCGT AGATAAACAT GGTATGAATA ATCTTATAGA TGAATTTGCC
AAATCAATAG ACTTAGAAAT AGAAAGAAAA TACGGTGTAA ATAGTGTTGA TTTAGCTAAT
ATAAAATCTC TTGTTAATTC TATAGTAAAT ATTGCTACAG AAAGACAGAT AAATATAAAA
GAAGAGTTAA AAAATTCATT TGAAGACTTT TTAAACAAAG TCTCAAGTGT TGTAGGATTC
GATTTGACCT TTAGTTCTGC GAAAGCCAAG TTAGATGCAT TTTCTGAAGA ACTAAACAAC
GCGGATAATT TATTAAAAGA AGTAGCATTG AATATCATAA AACTCCAAAA TCTCAGAATG
GCTTATGAAG GTTCTATCAA TGCTTGGAAA ATTATTAGAG CTCCTGAATT TGTTGAATCT
GTGCTCGTAA AAGATGGAAA AAGCATTGAA ATTGTGATGA AGAATGTTTC GCCAGTGTAT
TTTATGGATG ACAATATAAA AAATATACAC CTTAAATTTT CATTCTCGGA CGTAGTCAAA
AACGTTTTCC AAAATTACGT ATTGGCTTGG AAATCCGCTC CATTTGGAAG ATACTACATA
AACACAATTT TCATAGCAAC TGTAACTACG ATTCTTGAAG TTATAATTTC TGCAATGGCG
GCGTATGCAT TTTCTTGGAT GAACTTTCCA GGGAAGAATA TATTATTTAG TATATTCCTT
GCAACGATGA TGGTACCAGG AGAAGTTTTA CTTGTTCCAA ACTTTATAAC AGTTACAAAA
TTCGGATGGA TTGATACATA TTACGCGCTT ATTATTCCGT GGATCGTGAG TGTTTTCTCC
ATATTCCTTA TGAGACAACA TTTTCTGAGC TTACCAAGTG AATTGTTTGA CGCTGCCAAA
ATCGATGGAT GCTCACATTG GAGATACCTA TGGCAAATTG TTGTTCCATT AAGCAAGCCT
GTGGTTGTAA CAAGCGCACT TTTAAAGTTT GTTGGAAGTT GGAATTCGTT CCTATGGGTA
TTGATAGTAA CTAACAGTCC AAAATATAGG ACACTTACTG TCGGATTGCA AACATTCAGC
TCAGAAGTAG GTACGCTCTA TAACATGCTA ATGGCTGCAG CAACATTTAG TATACTCCCA
GTAGTTATAA TATTCTTGTT TACACAAAAA TACTTTGTCA GAGGTATTGC AAGAACAGGA
CTCAAATGA
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| Protein sequence | MKELRKLFIY ILLIFGTVVM IAPFAWMLVT SFKLPSEVNS WPPRWSTKSF STQRDVKVVP
STGTTSSVKG LSLREALTFV AKKTQGLVLV VNDDPFYRGT LTIPFKGSTY TLSLNQEEYK
QFLQSLKIPS DFSIDDEIEN NPEGFFEKVL LNYIYGATPV FKRTDFIERL SGNVETLLNG
IDTMLTFGID RIQDENEKEK FANFLEKKMK ELQELSTKIQ KYKAGNEVIL TIDELKEIRN
IISNYNLVYE NSNELSENYN NALQNSLLNY LDNINFFLST YDYFVKIQDK KVDENIVAQP
MTEEERKALL LEKIKDLEDF EDIKSFVDKH GMNNLIDEFA KSIDLEIERK YGVNSVDLAN
IKSLVNSIVN IATERQINIK EELKNSFEDF LNKVSSVVGF DLTFSSAKAK LDAFSEELNN
ADNLLKEVAL NIIKLQNLRM AYEGSINAWK IIRAPEFVES VLVKDGKSIE IVMKNVSPVY
FMDDNIKNIH LKFSFSDVVK NVFQNYVLAW KSAPFGRYYI NTIFIATVTT ILEVIISAMA
AYAFSWMNFP GKNILFSIFL ATMMVPGEVL LVPNFITVTK FGWIDTYYAL IIPWIVSVFS
IFLMRQHFLS LPSELFDAAK IDGCSHWRYL WQIVVPLSKP VVVTSALLKF VGSWNSFLWV
LIVTNSPKYR TLTVGLQTFS SEVGTLYNML MAAATFSILP VVIIFLFTQK YFVRGIARTG
LK
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