Gene Fnod_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0388 
Symbol 
ID5452817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp421512 
End bp422489 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content38% 
IMG OID640874137 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_001409910 
Protein GI154249085 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTC TTACAACAAG CGCACCACAT GTGAGAAATG AAGATTCAAC AAGGAAGATA 
ATGATAGATG TTTTGATAGC ACTAGTACCT GCTGTTATTG GTGCAACTTA CTTTTTCGGA
TTGTACGCGT TAGTACTATC TGTAATTGGT ATGGTAAGTG CTGAACTGAT TGAACTTTTT
ATAATGCGTG TTCTTAGGAA AGATAAATCT TTTGCTCCAA ATGGGAGTGC TGCTGTCACT
GGATTACTAC TTGCTTTGAA CGTTAGTGCC GCGACACCAT GGTGGGTTTT ACTTATTGGT
GTAGTGTTTG CTATAGCAAT CGTTAAGCAT GCATTTGGTG GCTTAGGGCA AAATATATTC
AACCCAGCTT TAGCTGCAAG AGTTTTCTTA CTTATATCTT TCCCAACAGC AATGACTACA
TGGTATAAAC CTATAACATC ATTTACTGGA TGGTATTCCG CAGATGTTCA AACGACTGCA
ACACCACTTG CTATTTTAAA ATTACAAGGT TTCAGTAAAG TTATGGAATC AACATCCTAT
ATAGATCTTA TATTTGGAAA TATAGGTGGT TGTATAGGTG AAACAAGTGC CATACTCCTA
CTCATTGGTT TTATTTACCT TGTACTTAGG GGAAGGATTA AAGTTGTTAT TCCTGCTACT
TATATTCTCA CTGTTTTAGT GATGGCTTCT ATTTTCTATG CAATTAACCC TGAAAAATTC
GGTTCTCCAG TATTTCATCT CTTTGCTGGT GGTCTAATGC TTGGTGCTTT GTTCATGGCA
ACAGACATGG TTACAAGTCC TATGACGCTA AAAGGTCAAG CGATATTTGG TTTAGGATGC
GGTTTACTTA CAATGATAAT TAGATACTTT GGTGGATATC CTGAGGGCGT ATCTTTGTCC
ATACTTCTTA TGAATGCTTT GGTACCTATG ATTGATAGAT ACACCCAACC CAAAATCTTT
GGGAGGCGAA AATCATGA
 
Protein sequence
MKLLTTSAPH VRNEDSTRKI MIDVLIALVP AVIGATYFFG LYALVLSVIG MVSAELIELF 
IMRVLRKDKS FAPNGSAAVT GLLLALNVSA ATPWWVLLIG VVFAIAIVKH AFGGLGQNIF
NPALAARVFL LISFPTAMTT WYKPITSFTG WYSADVQTTA TPLAILKLQG FSKVMESTSY
IDLIFGNIGG CIGETSAILL LIGFIYLVLR GRIKVVIPAT YILTVLVMAS IFYAINPEKF
GSPVFHLFAG GLMLGALFMA TDMVTSPMTL KGQAIFGLGC GLLTMIIRYF GGYPEGVSLS
ILLMNALVPM IDRYTQPKIF GRRKS