Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0382 |
Symbol | |
ID | 5451950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 416302 |
End bp | 416781 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640874131 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_001409904 |
Protein GI | 154249079 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA AGGTTATAAT CGGTATCGGA GAATGGGCAG TAGAAAAGAA TCCCTCCATC TTGGTAACAC TCGGACTTGG ATCTTGTGTA GGAGTTTGCG TTAGGGACCC GATTGCAAAG GTTGGAGCAA TGGTACATGT CATGTTACCA GATAGTGGAG GTAAACCGAC AAATACTCCA GGTAAATTCG CCGATACAGG TGTGGATATA ATAGTTGAGG AATTACTGAA AATGGGAGCC CAGAGAAATA GATTAGAGGC AAAGATAGCG GGTGGAGCTT CCATGTTCCA ATCTGCAATG GATATTGGTG CAAGAAACGT TGAGGCAGTA AAAAAATCTT TACAAAGAAA TGGGATAAAG CTCATTGCTG AAGACACTGG TGGTAACAAA GCAAGAAGTA TCGAATATGA TATAGAAACA GGAAAACTTT TGGTTAGAAA AGTTAAAACA GGCGATGCTG TGGAGGTTTC TGAAATCTGA
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Protein sequence | MKKKVIIGIG EWAVEKNPSI LVTLGLGSCV GVCVRDPIAK VGAMVHVMLP DSGGKPTNTP GKFADTGVDI IVEELLKMGA QRNRLEAKIA GGASMFQSAM DIGARNVEAV KKSLQRNGIK LIAEDTGGNK ARSIEYDIET GKLLVRKVKT GDAVEVSEI
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