Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0292 |
Symbol | |
ID | 5451906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 313167 |
End bp | 314039 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874038 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001409815 |
Protein GI | 154248990 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAT TTACAACCAA AACAAATCCA AAATACTTCC ATAAAAGTCA GTTAAAATTC TACTTTATAT TAACCCCTAT TGCGGTATTT ATGATGCTTC CAATTATATT CATTTTTTCT CAAGCATTTA AACCATTAGA CGAATTGTTC CTTTATCCAC CAAGATTTTT TGTGAGAAAA CCAACTTTAG CTAATTTTTA TGACCTCTTT TCGCTTACAA GAGGCTCAAC TATACCTATT AGCAGATACT TGATGAACAG TATTTTAACA GCGTTTTTCA CGGTGTTGTT TACAATAATA ATATCTGTTT TCGCTGGTTA CGCATTATCT AAAAAGCAAT TTAAAGCAAA AAGTTTAATA TTCACAATCA ATAATTTAGC GCTCATGTTC GTACCTATAG CTGTTATAAT CCCGAGGTAT TATATGGTTC AATCGCTTGG GTTGATTGAC ACGTTTATAA TCAATATTTT ATCCTTACTT GCGATGCCAA TAGGTGTCTT CCTTATCAAA CAATTCATGG ACCAAATACC AGATGCACTT ATAGATGCCG CACTTGTTGA CGGGGCAAAC GATTTTCAAA TAATATTTAA TATCATTATT CCTCTTTTAA AACCTGCTAT ATCAACTGTT GGAATATTAG CATTCCAAGT CGCTTGGAAT AGTGCAGAAG CTTCAACTTA CTATATAAAT AACGAAAATT TAAGAACATT CGCCTTCTAT GTGTCAAATC TCACACAAAC AACAGGTAAT ACAATAGCTG GTCAAGGTAT AGCGGCTGCT GCAGGGCTGA TAATGTTTGT GCCAAATTTG CTTTTATTCA TAATTATGCA ATCAAGGGTT ATGAACACAA TGGCTTACAG TGGACTAAAG TAA
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Protein sequence | MAKFTTKTNP KYFHKSQLKF YFILTPIAVF MMLPIIFIFS QAFKPLDELF LYPPRFFVRK PTLANFYDLF SLTRGSTIPI SRYLMNSILT AFFTVLFTII ISVFAGYALS KKQFKAKSLI FTINNLALMF VPIAVIIPRY YMVQSLGLID TFIINILSLL AMPIGVFLIK QFMDQIPDAL IDAALVDGAN DFQIIFNIII PLLKPAISTV GILAFQVAWN SAEASTYYIN NENLRTFAFY VSNLTQTTGN TIAGQGIAAA AGLIMFVPNL LLFIIMQSRV MNTMAYSGLK
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