Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0266 |
Symbol | |
ID | 5452812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 278305 |
End bp | 281892 |
Gene Length | 3588 bp |
Protein Length | 1195 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640874012 |
Product | diguanylate cyclase |
Protein accession | YP_001409789 |
Protein GI | 154248964 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTGC CAATAACAGC AGAAAAACAT GATGAATATT ACATTGTCAA ATTCGCTTAC TCGGATGAGA AACCCGTGCT AAATTACGAG GACAAAATAG ATGATCAATC CTTGAGAGAT TTGATTTATT CTTTGATGTT TTATATTTAC GGTGTTAAAA GTGGTGTATT TCCTTCTTTA GGTTATTATT CGTTAGATGA TATCTTTGTA TATGCAGGCC AAATATTCTT TTTACCACCT ACTGTCTACT CATGGGATTT TATATATAAG GTACTTGATA AATCAGGAAG GAGTTTATTT GTAGCTCCAG AATTTTTAGA AAAAGGTACC ACAAACTTTC AATCCACACT TTACGTCTGT GGTAAGATTA TAGAATATTT CGATCATAAA AAGAAATATA ATTTTATTAC TCAAGAATTG GTGAAAGAAA TACCTGAAGA CAGAAAGTTT TACGATGGAT GGTTAAAAGA ATTTGGATTA TTTGACAATG AAGAGATAGA AGAGTTCTCT AAAGAAATGT TTGAAAAAAT AAAGAATTCA AAGGAAAAAT TCAATATAAT AAGATTGAAA TCAGCACGTT GGATAGAATT AAATGCTGTA TTGCTCAGTA TAAATAAAAA AGTATCTAGT TTAGAAAATT CGGCAATGAT ATTTGTTAAG AACGACTTTA CGAATGTTCC AAGGCAGTTA ATGGCTAAAT ACAAAGGATA CGTTCCCGCT TCTGAATATA ACCTGTTTCT AAGAGCTCTT TATGATAATG TAAAGTTTAA TTCTATAATT CCAGTTATAA TTTCAACGTT TAATTCATTT GACAACATTT TTGTATTCAT AGAGGATTTA GATAATTCTG ATTATTTTGT TCGTAGTTTT ATTAGCTACT TAAGCGAAAG TAATTTGTCT AGTAAAGTAT ACGTCTTTTC TAAAGAATCA AAGTTTGCCA ATTTCACGTT TGAAATCCCT AAATCAATTA AATTTAAAGT CGAAGATAAG CCACATGCTT TTGACGAACT TTGTCCAAAG AATTTGAAGT ATCTTGCATT ACTTGGTGAG AACTTTTCAA GAAATGATGT GAGAAATCTT GAAAAATCTT TGAAAAATAG GCTTGAAAAA GAAATCGAAT ATGGTTTGAA AAAAGGTATT ATAGAATTAG ATGATGTTAA TTATAGATTT TCTAACGAAT ATTGGAAGCA ACTGTATGAG TCGATAGATT TAGGAGAAAA GGTTGCTATA CATTCTAAAC TTGCAAAGGT GTATTTGAAT TTGGATAATC CATACAGGGA TATTTTAAAA AGCGGATTCC ATTACACGTC CGCTGGTAAA GATATATCAG CTGCAGTAAT TTATTTGAGA TTCATAAAGA AAAATTTGGA TACATACGTA TTTTCAACTG AGCGAATGAA AGATATCTTT TCTAGGATTT ATTATCTTCT AAAGAAATGT AATCACCTTG ACTCTTATGC TTTTCATTCA CTCAAATTGA AGTTTCAATA TCAATCTTTT GAAGATTTAC CTTTTGAAGT TCCCTTGCCA GAAAGCAAAA AATTTCTGCA TCTCAAATTA TTGGAAAAAT ACATCAACAA TAAAGAAAGG GAAGTTATAG AAGATTTTAC AAAGTTTTTT GAAAAACCAC AAGTAAAATC TGAATATGAT TTTGAAGATT TTAAATTGCT TTCAGCTTAC TTAATTTACA ATTACTCGTA TTACAGAGTC TACGATAAGT TGGAGAATAC CGAAGAAGTA AAAAATATTG TTAATAATAT TAAGGAAAAA AACGAAAAGT GGGCGACTTT GAAAGCAGAA TATTTATTGC TGATAGCTAA TTCAATGTTA TATAAAAACG GAAAAGAAGC AAAGATTTAT TTAGAACAAA TGACAAAAAT CGCGACTCAC TATAACAAAA AATATCTTTT GATACAAGCA TACAATGCTT TTGGTATATT AAATGATGCA ACTGCTCTTT CTATTGATAA TTTTAGAAGG GCAATTCAAA TTTCAGATGA GATAGGTTAT GTAAAGAGAA AATTTATTCC GATGGTAAAC CTTTTAAGAG CATTACTTTA TTTTGGATAC ATTGAAGAAA TGCGAGATAA AATAGATGAG TTTGGGAAAT ATAAGTTAAT TATAAATAAT CCATCAGATT TAGCTTTTTA TTATAGAATA ATATCATTTT TACCTATGTA CGAACAAAAA TACAAGGAAG CAAAAGAGAT TCTCAACAAA TCTTTAGAGA TAGAATCTAA TTTTGGATTG CAAAAATCCT CGCTTAGAGC AATCATTCTA AATGAGCTTA TCTGCGGTAA TTACGATAAT GCAAGAAGAA TTATAGTTGA GAATAAAGAT GATCCAGCTA TAAAAACAAG AGCCTTCGAG TATTTAGTGA AGATGGTTTT AGCTGAGAAT GATGATGAAT TAAAAGAAAT ATGGATTGAA TATAAGAACT CATCTTACGA ACTTTTAAGG GAGGAGATAC TGTATATCTT CGCTGAAAAA ATTGCAAAAG TTGATTTAGA CGGATTTTTA AAAGAAATTA GTAAGTGGGA AAATGAGTAT ACAACCACCG GTGTTAAACT GTCGCTTTTT TACGTATTAC TTGCGAAACA TAAGTATCTA AAAACAATCG GGAATCATGT TCGTTTAGCG CAATTAAATT CTGAAATTTG TACACTTGCA AATGATATAA AAATTGATCA TCCTATCTTA AATGAATGTA TAAGTGAAAA CACGGATAAG TTCCTTGAAT TATTGCATAT CTTTAAGAGA ATAGACATGA AAATTACTAT AGAGCAATTT GTTAATCTTT TTGCAGCGGA AATTCATAGG CTATTTAGCG CAGAAAAATT ATTTTTGAAT GTCAATGATG AACTAATTGG AATTAGTTAT AATATATCGA ATATTCCGTA TATCACAGAA ATTCCAAAAG AAGAGGTATT TCAACTATCG CCATTGGAAG TTTTAATCAA AGAAAACATA GACGATAAAT CAAGTTATTT GATTTACATA TATAGTGAAA ATTACAAATC AAATGATTCT TACGAACTTG AGAAGAGGCT GACGTTATTA CAAGAGTTAT TTAGCGGGCA ATTAAGAGGC GTAATTTTAA GAGAAAGGGC AAACATAGAC AGTCTGACTG GTTTGTATAA CAGGTGGAAA TTTAACCAAT TTATCAACGA ACTTTTCGAT ACAAAATCAA AAGAATTTTC AATTTTTATT GCCGATATCG ATAATTTCAA AAAAATCAAC GATACTTATG GTCATATGGT TGGGGATAGC GTATTAAAAA ATATAGCTAA AATTTTGAAA GAACATGTAC GCGATGAAGG ATTAGTAGCA CGTTATGGTG GAGAAGAGTT TGTTGGGATA GTATATAAAT CAAAATATGA AGCAGCAAAA TTATGTGATA CTATAAGAGA AAATATAGAG AAAGAATCTT TAAAAATATT TGGTTTCAGA GTAACAATCA GTATAGGTAT GGCAGACGTT AATGAAAAAG AAAATGTTAC TGAATTGCTT GGTTTAGCTG ATCAGAGATT ATACAAAGCT AAAGAAGCGG GAAAAAACAG AGTTGTTTGG GGTGAATATA GATGCTGA
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Protein sequence | MFLPITAEKH DEYYIVKFAY SDEKPVLNYE DKIDDQSLRD LIYSLMFYIY GVKSGVFPSL GYYSLDDIFV YAGQIFFLPP TVYSWDFIYK VLDKSGRSLF VAPEFLEKGT TNFQSTLYVC GKIIEYFDHK KKYNFITQEL VKEIPEDRKF YDGWLKEFGL FDNEEIEEFS KEMFEKIKNS KEKFNIIRLK SARWIELNAV LLSINKKVSS LENSAMIFVK NDFTNVPRQL MAKYKGYVPA SEYNLFLRAL YDNVKFNSII PVIISTFNSF DNIFVFIEDL DNSDYFVRSF ISYLSESNLS SKVYVFSKES KFANFTFEIP KSIKFKVEDK PHAFDELCPK NLKYLALLGE NFSRNDVRNL EKSLKNRLEK EIEYGLKKGI IELDDVNYRF SNEYWKQLYE SIDLGEKVAI HSKLAKVYLN LDNPYRDILK SGFHYTSAGK DISAAVIYLR FIKKNLDTYV FSTERMKDIF SRIYYLLKKC NHLDSYAFHS LKLKFQYQSF EDLPFEVPLP ESKKFLHLKL LEKYINNKER EVIEDFTKFF EKPQVKSEYD FEDFKLLSAY LIYNYSYYRV YDKLENTEEV KNIVNNIKEK NEKWATLKAE YLLLIANSML YKNGKEAKIY LEQMTKIATH YNKKYLLIQA YNAFGILNDA TALSIDNFRR AIQISDEIGY VKRKFIPMVN LLRALLYFGY IEEMRDKIDE FGKYKLIINN PSDLAFYYRI ISFLPMYEQK YKEAKEILNK SLEIESNFGL QKSSLRAIIL NELICGNYDN ARRIIVENKD DPAIKTRAFE YLVKMVLAEN DDELKEIWIE YKNSSYELLR EEILYIFAEK IAKVDLDGFL KEISKWENEY TTTGVKLSLF YVLLAKHKYL KTIGNHVRLA QLNSEICTLA NDIKIDHPIL NECISENTDK FLELLHIFKR IDMKITIEQF VNLFAAEIHR LFSAEKLFLN VNDELIGISY NISNIPYITE IPKEEVFQLS PLEVLIKENI DDKSSYLIYI YSENYKSNDS YELEKRLTLL QELFSGQLRG VILRERANID SLTGLYNRWK FNQFINELFD TKSKEFSIFI ADIDNFKKIN DTYGHMVGDS VLKNIAKILK EHVRDEGLVA RYGGEEFVGI VYKSKYEAAK LCDTIRENIE KESLKIFGFR VTISIGMADV NEKENVTELL GLADQRLYKA KEAGKNRVVW GEYRC
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