Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0233 |
Symbol | |
ID | 5452434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 240702 |
End bp | 241541 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640873980 |
Product | HAD family hydrolase |
Protein accession | YP_001409757 |
Protein GI | 154248932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAGCA TGGAAAAAAT AGACGGCGTT ATCGAGCTAA GAAACGGTGT TGTCGAACGT ATTAAACAAT GTAATTTATT TATTTTAGAT ATCGATGGTA CATTCTATTT AAGTGGGAAA CCATTTGAAG GTTCACGTAA ATTTGTTGAT ATAGTTGAAC AACTTGGTAA AAAGTTTGTA TTTTTAACCA ACAATTCCAA CAGAACTATA GATAGCTATG TTGAAGAGTT TAAGAACATT GGATTTAACC TTTCGAAAGA GCATTTCATA ACAGCTGGTG TAGCAACCGC TGAGTATTTA TTTGAAGAAT TCGGTCCTGC TAAGGTTTAC ATCGTTGGAA CAGACGAGAT AAAAGAAGAA TTCAAAAGAG TAGGATTAAA TGTTGTAGAA GAAAACCCAG AAATTGTTGT CGTGACATTT GACAAGACAT TAACATATGA AAAAATCAAA AAAGCAACGC AATTTGTTGC TAATGGTGCG CTTTTTGTCG TAACAAATCC AGATTTGAAC TGTCCATCCG ACGAAGGACC ACTTCCTGAT GCAGGCGCTA TTGCATCAGT TATCAGAAAA GCTGCTGGAG TTTACCCTAA CATAGTATTT GGAAAACCAG AACCTAAACT TTTGGAAATG GTAATGAGAC GCTACAACAT AAGCCCAACT GAGACTTGTA TGATTGGTGA TAGACTTTAT ACAGACATAC TGGCAGGTAT CCAATCTGGA ACATGGACAG CACTTGTTTT GACAGGAGAG GCTACATTAG AACAAGCTGA AAAAGGACCT ATCAAACCTC ATATAATAGC AAAAGATATT GGGGTAATTG CAGAAATGCT TATAAAATAA
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Protein sequence | MKSMEKIDGV IELRNGVVER IKQCNLFILD IDGTFYLSGK PFEGSRKFVD IVEQLGKKFV FLTNNSNRTI DSYVEEFKNI GFNLSKEHFI TAGVATAEYL FEEFGPAKVY IVGTDEIKEE FKRVGLNVVE ENPEIVVVTF DKTLTYEKIK KATQFVANGA LFVVTNPDLN CPSDEGPLPD AGAIASVIRK AAGVYPNIVF GKPEPKLLEM VMRRYNISPT ETCMIGDRLY TDILAGIQSG TWTALVLTGE ATLEQAEKGP IKPHIIAKDI GVIAEMLIK
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