Gene Fnod_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0233 
Symbol 
ID5452434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp240702 
End bp241541 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content36% 
IMG OID640873980 
ProductHAD family hydrolase 
Protein accessionYP_001409757 
Protein GI154248932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAGCA TGGAAAAAAT AGACGGCGTT ATCGAGCTAA GAAACGGTGT TGTCGAACGT 
ATTAAACAAT GTAATTTATT TATTTTAGAT ATCGATGGTA CATTCTATTT AAGTGGGAAA
CCATTTGAAG GTTCACGTAA ATTTGTTGAT ATAGTTGAAC AACTTGGTAA AAAGTTTGTA
TTTTTAACCA ACAATTCCAA CAGAACTATA GATAGCTATG TTGAAGAGTT TAAGAACATT
GGATTTAACC TTTCGAAAGA GCATTTCATA ACAGCTGGTG TAGCAACCGC TGAGTATTTA
TTTGAAGAAT TCGGTCCTGC TAAGGTTTAC ATCGTTGGAA CAGACGAGAT AAAAGAAGAA
TTCAAAAGAG TAGGATTAAA TGTTGTAGAA GAAAACCCAG AAATTGTTGT CGTGACATTT
GACAAGACAT TAACATATGA AAAAATCAAA AAAGCAACGC AATTTGTTGC TAATGGTGCG
CTTTTTGTCG TAACAAATCC AGATTTGAAC TGTCCATCCG ACGAAGGACC ACTTCCTGAT
GCAGGCGCTA TTGCATCAGT TATCAGAAAA GCTGCTGGAG TTTACCCTAA CATAGTATTT
GGAAAACCAG AACCTAAACT TTTGGAAATG GTAATGAGAC GCTACAACAT AAGCCCAACT
GAGACTTGTA TGATTGGTGA TAGACTTTAT ACAGACATAC TGGCAGGTAT CCAATCTGGA
ACATGGACAG CACTTGTTTT GACAGGAGAG GCTACATTAG AACAAGCTGA AAAAGGACCT
ATCAAACCTC ATATAATAGC AAAAGATATT GGGGTAATTG CAGAAATGCT TATAAAATAA
 
Protein sequence
MKSMEKIDGV IELRNGVVER IKQCNLFILD IDGTFYLSGK PFEGSRKFVD IVEQLGKKFV 
FLTNNSNRTI DSYVEEFKNI GFNLSKEHFI TAGVATAEYL FEEFGPAKVY IVGTDEIKEE
FKRVGLNVVE ENPEIVVVTF DKTLTYEKIK KATQFVANGA LFVVTNPDLN CPSDEGPLPD
AGAIASVIRK AAGVYPNIVF GKPEPKLLEM VMRRYNISPT ETCMIGDRLY TDILAGIQSG
TWTALVLTGE ATLEQAEKGP IKPHIIAKDI GVIAEMLIK