Gene Fnod_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0228 
Symbol 
ID5452861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp235940 
End bp236941 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content34% 
IMG OID640873975 
Productglycosyl transferase family protein 
Protein accessionYP_001409752 
Protein GI154248927 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.2788e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGAGC AAAAGGTATC CATTGTGCTG CCTGTTAGGA ATGAGGCTAA GACTATACAA 
AAGGTGCTTG ATGGCTTACT AAGGCAGGAA TATGAAGATA TTGAAATTAT AGTTATTGAT
GGTATGAGTA CCGATGAAAC ACGTAATATA GTTCAAAGGT ATGTGGGGCG TTTTCCAGAA
AAGGTTAAAT TAATTGAAAA CGAAAAGGTT TATACCCCAT CTGGGCTTAA TATCGGTATC
CGTAATTCTT CAGGTGAATA TGTAATGATA GCAAGTGGAC ACGCTTCTTA TTCAAAAAAT
TACATTAAAG AATGTGTAAA AGCAATTGAA AGTAGTGAGT GTGATATAGC GGGTGGAGTC
GTTGAAGTTT TGCCAAGAAG TGAATCGAAG AAAGCTTTGG CGATAGCTGA AATCTTAAAG
CATCCATTTG GTATTGGCGG AGCGAGGTAT AAACTGGGCG CGGTCGAAAA AACTTATGTT
GATACTGTCG CATATGGTGT TTATAAAAGA GAAGTATTTG AAAAAGTTGG TCTTTTTAAT
GAAAATTTGA TAAGAAATCA AGATATCGAA TTTAACTTGC GGTTGAAGGG TTCAGGATAC
AGGATTATGT TGATTCCACA AGCAAGAGCT TACTATTTCG CGCGAGATAA GTATAAAGAA
TTGTGGAAAA ATAACTTTTC AAACGGTTTT TGGGTTACTT ACAGTAAAAA GTTTGCTGAA
AATCCTTACA GATTGAGGCA TCTTATTCCA TTGTTTTTCG TCGTTTACTT GATTACACTT
TTTGCATTTA TTCTATTCTT CGATGACTTT CTCAAAGTCA TTTTTTCAAT ACCTTTAATT
TTGTATTTTG TATTGAATAT TTTATCTTCA TTTGGAATTT CTCTAAATCA CAAAGATTTT
TCTTTGTTTT TTTACGCTTT GATAGGTTTT CTTACCTTGC ATATATCGTA CGGTATAGGT
TCACTCTTTG GGATTTTTAA ATTTTTGAAA GACAAAAAAT AA
 
Protein sequence
MAEQKVSIVL PVRNEAKTIQ KVLDGLLRQE YEDIEIIVID GMSTDETRNI VQRYVGRFPE 
KVKLIENEKV YTPSGLNIGI RNSSGEYVMI ASGHASYSKN YIKECVKAIE SSECDIAGGV
VEVLPRSESK KALAIAEILK HPFGIGGARY KLGAVEKTYV DTVAYGVYKR EVFEKVGLFN
ENLIRNQDIE FNLRLKGSGY RIMLIPQARA YYFARDKYKE LWKNNFSNGF WVTYSKKFAE
NPYRLRHLIP LFFVVYLITL FAFILFFDDF LKVIFSIPLI LYFVLNILSS FGISLNHKDF
SLFFYALIGF LTLHISYGIG SLFGIFKFLK DKK