Gene Fnod_0199 details

Gene Information

• Locus tag: Fnod_0199
• Symbol: tsf
• ID: 5452370
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 203998
• End bp: 204591
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640873946
• Product: elongation factor Ts
• Protein accession: YP_001409723
• Protein GI: 154248898
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000300429
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTA GTGCACAAAT GGTTAAGGAA CTTAGGGAAA GAACCGGCGC AGGTATGATG 
GATTGTAAAA ACGCACTTGC TGAAGCAAAC GGCGATTTTG AAAAGGCTAT AGAAATTCTT 
AGGAAAAAAG GACTGGCAAA AGCAGCTAAG AAAGCTGGAA GAGAAACAAA AGAGGGTCTT 
ATCATCTCTT ACGTTCACCA CAATGGCAAA ATAGGAGTTT TACTTGAACT CAACTGTGAA 
ACAGACTTCG TTGCGAGAAC AGATGACTTC AAAGAACTTG GTAACAAAAT CGCTATGCAC 
ATCGCAGCGA TGTCACCAAG ATGGGTTACA AGAGAAGAAG TACCAGCTGA TGTAATTGAA 
AAAGAAAAGG AAATATACAG AGAACAACTC AAAGATTCAG GAAAACCGGC GCAAGTTATT 
GAAAAAATTA TCGAAGGAAA GCTTGAAAGC TTCTATCAAG ACAACTGCTT ACTTGAACAA 
AAATTTGCTC TCGACCAAAA TGTAACAATT AAAGATATGA TTCAACAAGC AATCGCGAAG 
ATTGGAGAAA ACATCCAAGT TTCAAGATTT GTTAGAATGC AAATCGGGGA ATAA 

 

Protein sequence

MEISAQMVKE LRERTGAGMM DCKNALAEAN GDFEKAIEIL RKKGLAKAAK KAGRETKEGL 
IISYVHHNGK IGVLLELNCE TDFVARTDDF KELGNKIAMH IAAMSPRWVT REEVPADVIE 
KEKEIYREQL KDSGKPAQVI EKIIEGKLES FYQDNCLLEQ KFALDQNVTI KDMIQQAIAK 
IGENIQVSRF VRMQIGE