Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0185 |
Symbol | |
ID | 5452385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 190112 |
End bp | 190606 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640873932 |
Product | phosphodiesterase |
Protein accession | YP_001409709 |
Protein GI | 154248884 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAG AAAGTCTTTG GTTGATAATA AGTGATTCGC ATGACAACAT ACCAAATGTA AATAAAATTG TGGAAATAGC CAAAAAAAGA GGCATAAGCA AAATTTTTCA TCTTGGAGAT ATCGTTTCAC CTTTTCTTGC ACCATATTTT TTGCACGATG GAATAGAATT CTTAGGCATA TTTGGAAATA ACGATGGTGA AAAGTTATTT CTAATGCAAA AGTTCCAATC TAAACTCCAC AACGGACCTT ATGAAAAAGA AATTGACGGT TTTAGAGTAT TCTTAATGCA TGAACCATAT GCGCTTATAC CTGCTATAAA ATCTCAACTT TACGATTTCG TCTTTTATGG ACATACTCAT CAAATTGATA TACGTCAAGA AGGAAAAACG CTTATCATAA ATCCTGGAGA ATCATGTGGC TATCTAACGG GAAAAGCAAC AGCTGTTATT TTGGATCCTT CGAATAAAGA ATATGAAATC ATTGAAATAC AATAG
|
Protein sequence | MSKESLWLII SDSHDNIPNV NKIVEIAKKR GISKIFHLGD IVSPFLAPYF LHDGIEFLGI FGNNDGEKLF LMQKFQSKLH NGPYEKEIDG FRVFLMHEPY ALIPAIKSQL YDFVFYGHTH QIDIRQEGKT LIINPGESCG YLTGKATAVI LDPSNKEYEI IEIQ
|
| |