Gene Fnod_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0180 
Symbol 
ID5452481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp182580 
End bp183722 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID640873927 
Productmembrane protein 
Protein accessionYP_001409704 
Protein GI154248879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.62081e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGGA AACCTTTATT TTCATTTGAA ACTTTTGTAT TTCTTTTCTT TCTTATAATA 
TTTTTTTGGA TTTTTACTTC AACAATGGGA AGCGCAAATT TTTTTAAGAC TTTAATGTCA
ACTGCTCATG ACTTATTGTT AAATACTGTA TTCTTCATTA TGGCAGTTGC AGTATTAACT
GGTGCTTTCG CAGCTCTTTT GAATGAATTT GGAGTTATAT ACTGGATACA CCTGCTTCTT
GATAAATTGA TGAAACCCCT TTACAATTTA CCTGGAATTG CTGCAATGGG AATACTGTCA
ACTTACTTTT CTGACAACCC TGCTATAATT GCGCTTGCAA AAGATAAATC TTTCATCTCG
CATTTTGAAA AGTGGCAGGA ACCTTTATTA TGTAATCTTG GTACAGCATT TGGTATGGGA
ATGATTGTAT CTACTTTTTT CATTGCGCAG GGTGGAAGAG CTGGAGTTAA CCTAGTTCCT
GCAGTTATAG TTGGGAATAT CGCGACAATT ATAGGTAGTA TAGTCAGTGT TAGACTTTTC
TCTATATGGA CTAAGAAAAA GCTTGGGAGC GTTCATAAAG AAGTTGAGAA CGTAAATTTG
AAACATAGAG AGATAAGAGA AGGTAATGCC TTTGAAAGAT TCCTTGAAGC GATGTTAGAT
GGCGGGAAAA CGGGTGTTGA TATCGGTATA GGAATTATAC CAGGCGTTCT TATAATAAGC
ACACTCGTTA TGATGCTTAC ATTCGGCCCT AAGGACAACT CTGTCGGTTA TCAAGGACTT
GCATATGAAG GAATCGCACT TTTTGATAAA ATTGGAAAAT ACTTATTTTG GCCATTGAAA
ATCCTTTTTG GCTTCGATTC ACCACAGCTC ATTGCATTTC CTATCACTTG TCTTGGCTCA
ACAGGCGCGG CCCTCGCACT TGTTCCAAGA TTTATGGAAC ATGGCCTTAT AAAACCAAGT
GATGTGGCTG TCTTCACCGC TATTGGAATG ACATGGAGTG GATATCTGAG TACACACGTT
GGAATGATGG ATGCACTTGG ATATAGATAT TTAACAAGTA AGGCTATATT ATCACATACA
ATCGGTGGTA TAGTGGCTGG CTTCAGTGCA AATTTGATGT ATAATCTTTT TATTCATATT
TAA
 
Protein sequence
MNRKPLFSFE TFVFLFFLII FFWIFTSTMG SANFFKTLMS TAHDLLLNTV FFIMAVAVLT 
GAFAALLNEF GVIYWIHLLL DKLMKPLYNL PGIAAMGILS TYFSDNPAII ALAKDKSFIS
HFEKWQEPLL CNLGTAFGMG MIVSTFFIAQ GGRAGVNLVP AVIVGNIATI IGSIVSVRLF
SIWTKKKLGS VHKEVENVNL KHREIREGNA FERFLEAMLD GGKTGVDIGI GIIPGVLIIS
TLVMMLTFGP KDNSVGYQGL AYEGIALFDK IGKYLFWPLK ILFGFDSPQL IAFPITCLGS
TGAALALVPR FMEHGLIKPS DVAVFTAIGM TWSGYLSTHV GMMDALGYRY LTSKAILSHT
IGGIVAGFSA NLMYNLFIHI