Gene Fnod_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0168 
Symbol 
ID5452531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp172334 
End bp172693 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content34% 
IMG OID640873915 
ProductRNA-binding S1 domain-containing protein 
Protein accessionYP_001409692 
Protein GI154248867 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.07676e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTG GTCAAGTAGT AAAAGGTAAA GTAACAGAAG TACTCAAATT CGGAGCAAAC 
ATCGAATTAG AAAACGGGGA AAAAGGCTTT ATCCATATTT CAAAAATTTC AAATCAGTAC
GTTCAAAAAG TCGAGGATTT CTTGAAAGTT GGTCAAGATA TTGAGGCAAA AGTAATTGGA
AAAGGCAGAG ACGGCAAGTG GGAATTATCA CTCAAAGAAG AAACACAAGA AGACCAAACG
GAGGCAAAAA AGGAAGAATT CGAAAAGAAA CTTGTCAAAT TCCTTAAAGA TAGCCAAAAG
ACATATTCTG AATACAAAAA GAGATTGGAT AAAAAACAAG GTGTTACAAA GAGAAGATAA
 
Protein sequence
MEVGQVVKGK VTEVLKFGAN IELENGEKGF IHISKISNQY VQKVEDFLKV GQDIEAKVIG 
KGRDGKWELS LKEETQEDQT EAKKEEFEKK LVKFLKDSQK TYSEYKKRLD KKQGVTKRR