Gene Fnod_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0158 
Symbol 
ID5452604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp161483 
End bp162856 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content33% 
IMG OID640873905 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001409682 
Protein GI154248857 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain
[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0865096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGTT TAATTTTAAT GGGATGTGAG ACGTTGGCTT TAGATACACA AGATGAATTT 
TTTAAAAAGT TTGTAAATTT TATAAGAGAG TATGTTCCTA ATTGTTCATC GGTTCTCCTT
GCGGTCTCAG GTGGAGTAGA TTCTATTGTC ATGTTAGATC TTTTCAACAG AGCAAAGGAC
GAGTTATTAA TAAACATTGG AGTTGCTACT TTCAACCATA AGTTGAGAAC TGAAGCGGAT
GATGAGGTGA TTTTTGTTCA AAAATTTTGT GAAGGATTGG GAATTCCATT TTTTCCAGGT
GAAGCTGATG TAAAAATGTA TTGCGAGCAA AATAAGTTAT CAATAGAAGA AGGCGCACGG
ATTTTAAGGT ATGAATTTCT GAAACGTACT GCTAAAGAAA ATGGATACAG CTTTATAGCC
ACGGCACATA ACGCCAACGA TCTTTTAGAA ACAATAATAC TTAGGCAAAT AAAAGGCACT
GGACCTTTTG GTTTGGCGGC TATAAAGCCT ATAAATGGTA TATTTATAAG ACCACTTATC
TTTTTCACAC GTAAAGAGAT AGAAGAATAT GCCAAAGAAA GAAAACTTGA GTATGTTATC
GATAGGACGA ATTTTGATAT TGAGTACAAC CGAAATTTTG TAAGGCACAA AATAGTCCCC
CTCTTAAAAG AGATTAATCC TTCTGTTGAA AGTGCTTATT TAAAGCTGGC AAAAAATATC
TGGGAACTTG ATAGTTATGT AGATAGAGCT ATTGGTATTG ATAAGAGTAA TCTTGAAAAA
ATCGGAAACA ATTTTATTTT TAAACTGGTA AATGATGAGT ACCTTCAGAT TGAACAAATT
AGAAGGTATT CTTTGTTGTT ATTTGGTAAA CCATTAGATT ACGAAAAACT TGAACGATTT
AAAAAAGCAA GAAGCTCTGG AAAACCGTCT TATAAAATAT CTTTTTGGGG AGCACTTGGA
ATTGAGATTT CTTATGGGTG GTGTATGATG GGAGACATAG TAAATTATCC GGTTTTTGAA
AAGATTGTAT GCTTTGATGG AAGCAAAGAG TTTGAGCTAA TAGAAGCAAA CGGTTACTTT
ATAAAATTTG CAAAGTATGA TATAATTAAT AAAAAAGAGC ATACAAATGT GTGTTTTAAG
GTTCGCAATT GGAGAGGTGG TGATAGGTTG TTGAGTGGTA AAAAAGTTAA AGAATTATTT
TCAGAGAGGA AAGTTCCAAC GTTTTTAAGA AAGTTGATAC CGCTTGTGTT TTTATCCGAA
AGCGAGCAAG ATAGTAAAGT TATTTACATA CCGTTTTTGT ATGAAGCAAA AAGCTATCTA
AATGATATTG GTGTTTTTAT AGAAACGAAA GGAGGTTTTC ATTTTGAATC GTAA
 
Protein sequence
MVSLILMGCE TLALDTQDEF FKKFVNFIRE YVPNCSSVLL AVSGGVDSIV MLDLFNRAKD 
ELLINIGVAT FNHKLRTEAD DEVIFVQKFC EGLGIPFFPG EADVKMYCEQ NKLSIEEGAR
ILRYEFLKRT AKENGYSFIA TAHNANDLLE TIILRQIKGT GPFGLAAIKP INGIFIRPLI
FFTRKEIEEY AKERKLEYVI DRTNFDIEYN RNFVRHKIVP LLKEINPSVE SAYLKLAKNI
WELDSYVDRA IGIDKSNLEK IGNNFIFKLV NDEYLQIEQI RRYSLLLFGK PLDYEKLERF
KKARSSGKPS YKISFWGALG IEISYGWCMM GDIVNYPVFE KIVCFDGSKE FELIEANGYF
IKFAKYDIIN KKEHTNVCFK VRNWRGGDRL LSGKKVKELF SERKVPTFLR KLIPLVFLSE
SEQDSKVIYI PFLYEAKSYL NDIGVFIETK GGFHFES