Gene Fnod_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0147 
Symbol 
ID5452487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp148928 
End bp149536 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content33% 
IMG OID640873894 
Productphage SPO1 DNA polymerase-related protein 
Protein accessionYP_001409671 
Protein GI154248846 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG AAGAAATGAT GGCGATAATT GAAGAAAGAA TAAAAAATTG TCAAAGCTGC 
CATTTGCATT TACTTAGAAA AAATACAGTT CCTGGTGAAG GAAATATATA TTCACCTATA 
ATGTTTGTTG GTGAAGGGCC TGGCGAAGAA GAAGACAATC AAGGCAGACC ATTTGTTGGT 
AAAGCCGGAC AACTTCTTAC AAAGATTATA GAATCAGTTA ATATAAAACG TGAGGATGTG 
TATATTACCA ACGTTGTTAA ATGTAGACCA CCAAATAATC GTGTCCCGAC AAACCTAGAA 
ATTCAATCAT GTTCTCATTA TTTGACAGCT CAAATAGAGA TAATTAACCC ACGTATGATA 
ATACCGCTTG GTAGTACAGC TGCAACGTTT TTCTTAGGAA AAGAAGAACC AATAACAAAA 
ATTCGTGGGA AAAAATTCAC TTGGAAAGGT GATATCATAA TTTTTCCCAT GTTCCACCCA 
AGCTATCTTT TAAGAAACCC GTCTAAAGAA AAAGGAAGCC CAAAAGATTT AACTTGGCAA 
GATATAAAAG AAGTTAGAAG ATATTACGAT CAGTTTATGG AAGAAATTAC TGGTAAAATT 
AATAGATAA
 
Protein sequence
MKKEEMMAII EERIKNCQSC HLHLLRKNTV PGEGNIYSPI MFVGEGPGEE EDNQGRPFVG 
KAGQLLTKII ESVNIKREDV YITNVVKCRP PNNRVPTNLE IQSCSHYLTA QIEIINPRMI 
IPLGSTAATF FLGKEEPITK IRGKKFTWKG DIIIFPMFHP SYLLRNPSKE KGSPKDLTWQ 
DIKEVRRYYD QFMEEITGKI NR