| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0125 |
|---|
| Symbol | |
|---|
| ID | 5453295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 125882 |
|---|
| End bp | 127072 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640873872 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001409649 |
|---|
| Protein GI | 154248824 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0192] S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00105717 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAC TTTTTACAAG TGAAAGTGTC ACAGAAGGAC ACCCAGATAA GATGGCAGAT
CAAATTAGTG ATGCCATCTT AGACGCGATT ATTGAGCAAG ATCCGAAAGC TCGTGTAGCT
GTTGAAACAC TTCTTACAAC AGGTGTTGCC ATTGTTGCGG GAGAAGTTAC AACAAAAGCT
TACGTTGATG TGCAGGACAT TGTTAGAAAA ACTGTGCTTG ACATCGGTTA TACAAGAGCA
AAGTATGGTT TTGACGGTGA AACATGTGCA GTTCTTTCAT CCATTCACAG TCAGTCACCT
GACATAGCTC TTGGTGTTAA CGAAGCTGCA GAGTTTAAGC AGGGCGATAA AGCAGAAGAT
GAGATTGAAA AAGTTGGAGC TGGTGACCAA GGAATGATGT TTGGTTACGC TACTAACGAA
ACAGAAGAGC TTATGCCTCT TCCAATTATG CTTGCTCACA AGCTTGCTAT GAAGCTCGCC
GAGGTAAGAA AAAATGGAAC AGTTCCTTTC TTAAGACCAG ATGGAAAAAC ACAAGTCACG
ATTGAATATG ATGAAAACGA AAAACCAGTA AGAGTTGATA CAGTACTTAT ATCCACTCAA
CACGAACCAG ATGTAACTAT TCCTGAGATA AGAGAAGCGC TTGTAAAGTA TGTTATAAAT
CCAATTATTC CAGAGAATCT TAGAGATGAC AATATGAAAA TCTTGGTCAA TCCAACCGGT
AGATTCGTTC TTGGTGGACC ATCTGCTGAT ACTGGATTAA CTGGAAGAAA GATAATCGTT
GATACATATG GTGGGGCTAT ACCACATGGT GGAGGAGCAT TCAGCGGAAA AGATCCGACA
AAAGTTGACA GATCAGCTCA TTATTTCGCA AGATACGTTG CGAAGAACGT TGTTGCGGCA
GGTCTTGCGG ATAAATTCAT GATCCAAGTA GCTTACGCAA TTGGTGTTGC AAGACCAGTA
TCTATAATGA TTAATACATT TGGAACGGCA AAAGTAGACG AAGAAAAATT GAGAAAAGTT
GTTGAAGAAA TTTTCGATTT CAGACCAGGT GCGATAATTA AAAAACTCGA TCTTCTTAGA
CCAATTTACA GAAAGACAGC TGCTTACGGA CATTTTGGAA GAAATGACCC AGACTTTACC
TGGGAAAGAA CGGACATGGT TAGAGAGTTA AAAGCTGCTT TCAACCTTTA A
|
|---|
| Protein sequence | MRRLFTSESV TEGHPDKMAD QISDAILDAI IEQDPKARVA VETLLTTGVA IVAGEVTTKA
YVDVQDIVRK TVLDIGYTRA KYGFDGETCA VLSSIHSQSP DIALGVNEAA EFKQGDKAED
EIEKVGAGDQ GMMFGYATNE TEELMPLPIM LAHKLAMKLA EVRKNGTVPF LRPDGKTQVT
IEYDENEKPV RVDTVLISTQ HEPDVTIPEI REALVKYVIN PIIPENLRDD NMKILVNPTG
RFVLGGPSAD TGLTGRKIIV DTYGGAIPHG GGAFSGKDPT KVDRSAHYFA RYVAKNVVAA
GLADKFMIQV AYAIGVARPV SIMINTFGTA KVDEEKLRKV VEEIFDFRPG AIIKKLDLLR
PIYRKTAAYG HFGRNDPDFT WERTDMVREL KAAFNL
|
|---|
| |