Gene Fnod_0109 details

Gene Information

• Locus tag: Fnod_0109
• ID: 5453100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 112891
• End bp: 113589
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640873855
• Product: hypothetical protein
• Protein accession: YP_001409633
• Protein GI: 154248808

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.385594
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAAAA ATTCAAAAAT TAAGAATAAG GTGAAAAATA TGGAAAATAA AATAGCAAAA 
AACTATGCTT TTATTGGACT TTTTGGAAGT GGAAAAACGG AAGTAGCTAT AAACTGGGCA 
TTGAAATTGA AGGATGAATA CGAAAAAGTT GCGATAATCG ATGGTGACAT AATCTCTCCA 
TATTTTAGAA CAAGAGACGT AGCTGAAGAT TTGGAAAAAA TGGGATTAGT CACTGTGTAT 
CCAAAAGGCG CTTTGAGAAA TGCGGATTTA CCCATAATAA CTGGTGGAGC GATTGGTTAC 
CTTGTTAATC AAGAGTATAA AACAGTTATC GATGTTGGTG GTGAAGAAAA CGGTATAGTT 
GTCCTTGGTT ATTTGAAGCC GTATCTTGGT AATGCAGAAA TTAGTATGGT GGTTAACATA 
GCAAGGCCAT TTTCATCAAC CGTCGATGGA ATTATAAAAG CTTACGAGCA GTTGAGAAGA 
GTAGCAAGAA TAGAAGTTGA TTATCTTATA AACAACGCAA ATCTTTCATA TGAAACAACC 
CCAGAGTTGA TTAAAAAAGG AGAAGAAATA GTAAGTAAAG TGTCAGAGAT AATAGAGGTG 
CCAGTGAAAT TTACCGTTGT GCCTGAATTT TTAAACGTAG ACGACTTAAA ATATCCCATT 
TTCAAAATCA AAAGATTTAT GAAAATGGAA AATTATTGA 

 

Protein sequence

MSKNSKIKNK VKNMENKIAK NYAFIGLFGS GKTEVAINWA LKLKDEYEKV AIIDGDIISP 
YFRTRDVAED LEKMGLVTVY PKGALRNADL PIITGGAIGY LVNQEYKTVI DVGGEENGIV 
VLGYLKPYLG NAEISMVVNI ARPFSSTVDG IIKAYEQLRR VARIEVDYLI NNANLSYETT 
PELIKKGEEI VSKVSEIIEV PVKFTVVPEF LNVDDLKYPI FKIKRFMKME NY