Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0105 |
Symbol | |
ID | 5453094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 108588 |
End bp | 109823 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873851 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001409629 |
Protein GI | 154248804 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAG AAAGCAAACT TTCAGAAATA GGTAAAAACT TGAGATCCTC ACTTATTAGG GAACTTTTAA AGTATGCTTC AGTACCAGGT TCTATATCTT TTGGCGGTGG AGTTCCCGAT CCAGAAACGT TCCCAAGACA CGAACTTGCT GAAATTGCCA AAGAAGTTAT CGAAAAAGAT TATAAATATA CGTTACAATA CAACACAACT GAAGGTGATG ATGAACTTGC CAAACAAATG GTAAAACTCC TTGAAAAAGC GTATGGAATA ACCGGAATTG AACGTGAAAA TTTGCTTTTT ACCACGGGTT CGCAACAAGC TCTTGACCTG ATTGCAAGAA TTTTCTTAGA CAAAGATAGT ATATGTATAG CCGAATTTCC TGTTTACCTT GGTGCTGCAA GTGCATTTAG AATTAATTTC CCAAAATTCG AAACTATACC TTTACAAGAT GATGGTATGG ATGTCGATTA TCTCGAAAAG AAGTTGAAGG AGCTAGATGA AAAAGGGTTG GTAAACCAAG TGAAGTTTAT TTACACAGTC CCTACCTTCC ATAATCCCGC CGGCGTGACG ATGAGCTTAG AGAAGAGGAA GAGATTAATA GAACTTGCGG AGAAATACGA TATATTGATT CTAGAAGATG ATCCTTATGG AATGCTTAGG TTTGAAGGTG AAAATTTGCC ATCACTTTAC AAATTGGCAG GTCCGGATAG AGTTGTTCTT TTAAACACAT TTAGCAAAAT TCTTACACCA GGTCTCAGAT TGGGAATAAT CATTGGACGT GCTGATATTG TTAGAAAAGC AACCTTGGCA AAGCAAGCTG CAGATCTTTG TAGTCCAAGT TTGAATCAAA GAATTGCCGC AAGGTATTTA GAAAGATACG ATTTATTCGA GCAGTTAAAA CCTGGTATTG AACTTTACAG AAAAAAGAAG AATACCATGA TTAAAGCTCT CGAAGAGAAT TTCTCAGATA TCCCAGGTGC AAAATGGGTC AATCCACAAG GTGGATTGTT TGTGTGGATG ACTCTTCCTG AAGGTTTCGA TACTATGGAT ATGTTCGAAA TAGCAAAAGA AAAGAAGATA TACTACATAC CCGGTCAAGC ATTTACCGTT GATGATAGTG TATCCACTTC TATGAGGTTA TCTTTCTGCT TACCACCTGA AGAAAAGATC ATTGAAGGTG TGAAAAGACT CAAAGAGGTT GTTGTAGAAT ACGGGAAGAA AAAGGGGTTG ATTTGA
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Protein sequence | MDLESKLSEI GKNLRSSLIR ELLKYASVPG SISFGGGVPD PETFPRHELA EIAKEVIEKD YKYTLQYNTT EGDDELAKQM VKLLEKAYGI TGIERENLLF TTGSQQALDL IARIFLDKDS ICIAEFPVYL GAASAFRINF PKFETIPLQD DGMDVDYLEK KLKELDEKGL VNQVKFIYTV PTFHNPAGVT MSLEKRKRLI ELAEKYDILI LEDDPYGMLR FEGENLPSLY KLAGPDRVVL LNTFSKILTP GLRLGIIIGR ADIVRKATLA KQAADLCSPS LNQRIAARYL ERYDLFEQLK PGIELYRKKK NTMIKALEEN FSDIPGAKWV NPQGGLFVWM TLPEGFDTMD MFEIAKEKKI YYIPGQAFTV DDSVSTSMRL SFCLPPEEKI IEGVKRLKEV VVEYGKKKGL I
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