Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0103 |
Symbol | |
ID | 5453125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 106115 |
End bp | 107026 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873849 |
Product | phosphoglycerate dehydrogenase |
Protein accession | YP_001409627 |
Protein GI | 154248802 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTAC ATATAAACGA TCCTCTTGAC AAACAAGCAA CAGAAAAACT TGCGTCTTTG CCTAATATTC AATTAACATC TCAACACTAC GAAAAAGAAG AACTTATAAA GCTTATGCCA GAAATCGAAA TTCTTGTTGT AAGGAGTGCC ACAAAAGTTA CAGCGGATAT AATCGAAGCT GGAACAAAAT TGAAAATAAT AGGAAGAGCA GGTACAGGTC TTGATAACAT TGATGTCAAA GTAGCTGAAG CCAAAGGAAT AAAAGTAATC AACACACCAG GTGCAAACAG TATTTCTGTT GCAGAACTCA CGATAGGGTT GATGATTGCA TGTTCAAGAC ATATCGCAAG GGGAACAATA GACTTGAAGA ACGGTAAATG GACAAAGAAA GAACTTGAAG GTCATGAGCT ATACAAAAGA ACAGTTGGTA TAATTGGTTT TGGAAACATT GGAAGAGAAG TTGCAAAAAG ATTGCTCGCC TTTGATATGA ATGTATTAGC ATACGATCCT ATCGTAAAAG AAACTGATAT GAACGTAAAA CTTGTTGACC TCGACACATT AATTTCCAAT AGTGATTACA TAACAATTCA CGTACCACTT ACTCCAGAAA CAAAAAACTT AATTAACAAA GACACAATTT CAAAGATGAA AGATGGAGTA ATCATAATCA ACGCTGCTAG AGGAGGAATA GTAGACGAAT CAGCACTTTA CGAAGCTCTC TTAAGCGGGA AAATCTACGC AGCGGGTTTA GACGTATTCG AAGTCGAGCC ACCAACAGAC GAACTTAGAC AAAAACTTCT TTCCCTTCCA AATGTTGTTG CAACACCACA CGTTGGAGCA TCAACATTCG AAGCGCAAGA AAGAGTTGGA ATGTTACTAG TCGAAAGATT AATAAAAGAA ATAGCTGGGT AA
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Protein sequence | MRVHINDPLD KQATEKLASL PNIQLTSQHY EKEELIKLMP EIEILVVRSA TKVTADIIEA GTKLKIIGRA GTGLDNIDVK VAEAKGIKVI NTPGANSISV AELTIGLMIA CSRHIARGTI DLKNGKWTKK ELEGHELYKR TVGIIGFGNI GREVAKRLLA FDMNVLAYDP IVKETDMNVK LVDLDTLISN SDYITIHVPL TPETKNLINK DTISKMKDGV IIINAARGGI VDESALYEAL LSGKIYAAGL DVFEVEPPTD ELRQKLLSLP NVVATPHVGA STFEAQERVG MLLVERLIKE IAG
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