| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0099 |
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| Symbol | |
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| ID | 5453090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 102828 |
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| End bp | 103565 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640873845 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001409623 |
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| Protein GI | 154248798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA AAATTTCTAA AAAAGAGTCT GAAATAAAAT CGATTAGGTT AGATAAGTTC
CTTTCGAATG CTCACATTGG AACGAGAAAT GAAGTAAAAA AGATTATAAA AGAGGGCAGA
GTAAGTGTTA ACTTTGAAAT TATAAGAAAT CCCGATTTTC ACGTAAAACT TGACGATATA
ATTGAATTAG ATGGTAATAG AATAGAACCA CATAAGAACG TTTATATAAT ATTTCATAAA
CCTTCCGGAT TCGTTTCTAC CACGTCCGAT AGAGAACCAA GCGTGCTTAA TTTAATTGAC
CATCCTTATC TAAATGAACT GCACATAGCC GGAAGACTTG ATAAAGATGT TGAGGGCTTG
CTTATCTTAA CAAACGATGG TGAATTTACA CACAATTTAA TTTCACCAAA GAAACATATA
GAAAAAGAAT ATTGGATATA TACAAAAGAA AACGTTGAAG TTACGCAAAA CATGGTTAAG
ATGGTCTCAG AAGGTATAGA ACTAGAGAAA GGTACAAAAA CTTTGCCAGG TAAGATAAGA
AAAGTTTCTG AAAAAATAAT TTCTCTAACT ATTGTGGAAG GTAAATATCA TCAGGTAAAG
AAAATGTGTA TATCTTTAGG CATTGAGTGG GAAAAAATCG TTCGTGTTAG AATTGGTAAC
TTGACACTTG AAGGTTTGGA AAAAGGTAAG TGGAAAGAAC TCTCCAAAGA AGAGATTTCA
AAATTTATAT TTGGATAA
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| Protein sequence | MSKKISKKES EIKSIRLDKF LSNAHIGTRN EVKKIIKEGR VSVNFEIIRN PDFHVKLDDI
IELDGNRIEP HKNVYIIFHK PSGFVSTTSD REPSVLNLID HPYLNELHIA GRLDKDVEGL
LILTNDGEFT HNLISPKKHI EKEYWIYTKE NVEVTQNMVK MVSEGIELEK GTKTLPGKIR
KVSEKIISLT IVEGKYHQVK KMCISLGIEW EKIVRVRIGN LTLEGLEKGK WKELSKEEIS
KFIFG
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