Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0080 |
Symbol | |
ID | 5453327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 86229 |
End bp | 86987 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640873826 |
Product | hypothetical protein |
Protein accession | YP_001409604 |
Protein GI | 154248779 |
COG category | [S] Function unknown |
COG ID | [COG1912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.158966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTAT TCATGACTGA TTGGGGCAGT TCTCATTATG TTGGTATATG CAAAGGAGTA ATGAGAAGTA TAACAAATGA TGAAATAGTT GATTTAACTC ACTCAATTAC GCCGTACAAC GTTAGAGAAG CTATGTATAT TTTAGATAGA AGTGCAGATT GGTTCCCCGA AAAGAGTGTT TTTTTAGTAG TCGTCGACTA CGGTGTTGGA ACAGCCAGAA AAGCAATTGC AGTGGAAACC GACAAATATT ATTTCGTGGC TCCTGATAAC GGAGTTTTGA CACTCGTACT TGAACGTTAC CAACCGAAAA GCATAATCGA TTTGGTTAAT AAAAAATATC ATCTTGGAAG CTCGAAAACA TTCCATGGAA GAGATATATT CTCTCCTGCT GCTGCGTATA TAACAAAAGG TATTTTTAAC GAACTAGGCA CAAGATTACC TAATTACGCA ACGATACCAT ATAGGAAAGC CCATAAATCA AACAATGTAA TACACGGTGA AATTGCGTAT TTTGACAGAT TTGGAAACGT TGAAACTAAC ATACCATTCT CCTGGATAGC TGAAAAAGAT TCCGTAAATC TAAAAATAGG AAATAAAACA TATCAAATTC CTGTCGTTGA AACGTATGCG GATGTTGATG AAGGCGAACT TTTAGTGCAC GAAGATAGCA CAGGGTATGT AGAAATAGCC ATAAACAAAG GAATTGCACG TGAAAAATTA CGTTGTATTG AAGGATGTGA AATAGAAGTT CACATTTAA
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Protein sequence | MIVFMTDWGS SHYVGICKGV MRSITNDEIV DLTHSITPYN VREAMYILDR SADWFPEKSV FLVVVDYGVG TARKAIAVET DKYYFVAPDN GVLTLVLERY QPKSIIDLVN KKYHLGSSKT FHGRDIFSPA AAYITKGIFN ELGTRLPNYA TIPYRKAHKS NNVIHGEIAY FDRFGNVETN IPFSWIAEKD SVNLKIGNKT YQIPVVETYA DVDEGELLVH EDSTGYVEIA INKGIAREKL RCIEGCEIEV HI
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