Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0074 |
Symbol | |
ID | 5452012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 80687 |
End bp | 81436 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873820 |
Product | tetrahydrodipicolinate succinyltransferase domain-containing protein |
Protein accession | YP_001409598 |
Protein GI | 154248773 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATA TATCCAATAA GAAGGTAAGT GAATTAACCA GTGAAGAGAT AATACAACTC ATAGCTAACA GTAAGAAGAA AACCATAGTT AGAGTTTACG TAAGTGGTAA CTTAAAGGCT TTGGATATTC GTGATTTCGA AGGATACGGT AAAGAATTTG AGTTTGTTGG TGGTCAAGAT TTTGGTGTGC TTTTTGGAAA TTACGAATAT ATAAAAGAAA TACTCCGAAA CAATTCAATC ACTTCTTTTA AAGTTGAATA CATAGCACAT AATTCGGCTA TACCACTTTC CGATATTTCA AAATTTAACG CTCGAATAGA GCCTGGCGCG ATAATTCGTG AATATGTTGA AATAGGTAAT AACGCAGTTA TTATGATGGG TGCGGTAATT AATTTGGGAG CTATCATTGG TGAAGGTACA ATGATTGACA TGAATACTGT TATTGGTGCA AGAGCAAGGA TTGGAAAATA TTGTCACATT GGTGCTGGGA GTGTTATCGC CGGGGTTGTT GAACCACCAA GTGCTCAACC AGTGATTATA GAAGATAACG TTGTAATAGG TGCAAATGCG GTCATTTTAG AAGGTGTAAG GGTTGGTGAA CACTCCGTTG TTGCGGCTGG TGCGGTCGTT GTTGAAGATG TTCCACCTTA CACGGTGGTT GCGGGTGTTC CAGCAAAAGT AATTAAAAAA GTTGATGAAA AAACTATAAG TAAAACACAG CTCATCGAAG AATTAAGAAA ATTGAGGTGA
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Protein sequence | MADISNKKVS ELTSEEIIQL IANSKKKTIV RVYVSGNLKA LDIRDFEGYG KEFEFVGGQD FGVLFGNYEY IKEILRNNSI TSFKVEYIAH NSAIPLSDIS KFNARIEPGA IIREYVEIGN NAVIMMGAVI NLGAIIGEGT MIDMNTVIGA RARIGKYCHI GAGSVIAGVV EPPSAQPVII EDNVVIGANA VILEGVRVGE HSVVAAGAVV VEDVPPYTVV AGVPAKVIKK VDEKTISKTQ LIEELRKLR
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