Gene Fnod_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0074 
Symbol 
ID5452012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp80687 
End bp81436 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content37% 
IMG OID640873820 
Producttetrahydrodipicolinate succinyltransferase domain-containing protein 
Protein accessionYP_001409598 
Protein GI154248773 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
[TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATA TATCCAATAA GAAGGTAAGT GAATTAACCA GTGAAGAGAT AATACAACTC 
ATAGCTAACA GTAAGAAGAA AACCATAGTT AGAGTTTACG TAAGTGGTAA CTTAAAGGCT
TTGGATATTC GTGATTTCGA AGGATACGGT AAAGAATTTG AGTTTGTTGG TGGTCAAGAT
TTTGGTGTGC TTTTTGGAAA TTACGAATAT ATAAAAGAAA TACTCCGAAA CAATTCAATC
ACTTCTTTTA AAGTTGAATA CATAGCACAT AATTCGGCTA TACCACTTTC CGATATTTCA
AAATTTAACG CTCGAATAGA GCCTGGCGCG ATAATTCGTG AATATGTTGA AATAGGTAAT
AACGCAGTTA TTATGATGGG TGCGGTAATT AATTTGGGAG CTATCATTGG TGAAGGTACA
ATGATTGACA TGAATACTGT TATTGGTGCA AGAGCAAGGA TTGGAAAATA TTGTCACATT
GGTGCTGGGA GTGTTATCGC CGGGGTTGTT GAACCACCAA GTGCTCAACC AGTGATTATA
GAAGATAACG TTGTAATAGG TGCAAATGCG GTCATTTTAG AAGGTGTAAG GGTTGGTGAA
CACTCCGTTG TTGCGGCTGG TGCGGTCGTT GTTGAAGATG TTCCACCTTA CACGGTGGTT
GCGGGTGTTC CAGCAAAAGT AATTAAAAAA GTTGATGAAA AAACTATAAG TAAAACACAG
CTCATCGAAG AATTAAGAAA ATTGAGGTGA
 
Protein sequence
MADISNKKVS ELTSEEIIQL IANSKKKTIV RVYVSGNLKA LDIRDFEGYG KEFEFVGGQD 
FGVLFGNYEY IKEILRNNSI TSFKVEYIAH NSAIPLSDIS KFNARIEPGA IIREYVEIGN
NAVIMMGAVI NLGAIIGEGT MIDMNTVIGA RARIGKYCHI GAGSVIAGVV EPPSAQPVII
EDNVVIGANA VILEGVRVGE HSVVAAGAVV VEDVPPYTVV AGVPAKVIKK VDEKTISKTQ
LIEELRKLR