Gene Fnod_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0042 
Symbol 
ID5452003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp46149 
End bp46661 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content36% 
IMG OID640873792 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001409570 
Protein GI154248745 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00633059 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCG AACTTGAAAA CTACTTAAAG AATGTTACCA TAAAAGAGTC AAAAAATGAA 
CGGGAAAGTT GGGATGAATA TTTTAAAAGA CTTGCAAAAG TTATTGCTGA GCGCTCTACA 
TGCGTTCATA GAAAAGTTGG AGCATTGATT GTCAAGGATA AAAGAATTCT CGCAACGGGT 
TACAACCAAC CACCTTCTGG ATTTCCGCAT TGCGATGAAA TAGGATGCAT AAGGGATGAT 
TTAAGTATTC CATCTGGAAA AAATCAAGAG ATTTGTTATG GTCTACATGC CGAACAAAAT 
GCACTTATAC AGGCAGCGAA ATTTGGTATC TCTACAGATG GAGCAACCAT ATACGTTACT 
CATAAACCGT GTTCTGTATG CGCAAGATTG ATAATTAACG CTGGCATAAA AAAAGTTGTT 
TATATAGAAG GATATCCAGA TCCACTTACG GATTTTTTCT TTAAAACATG TGGAATAGAA 
TTAGTTGGAG GTGATCAAAT TGAAAAGGGA TAA
 
Protein sequence
MSFELENYLK NVTIKESKNE RESWDEYFKR LAKVIAERST CVHRKVGALI VKDKRILATG 
YNQPPSGFPH CDEIGCIRDD LSIPSGKNQE ICYGLHAEQN ALIQAAKFGI STDGATIYVT 
HKPCSVCARL IINAGIKKVV YIEGYPDPLT DFFFKTCGIE LVGGDQIEKG