Gene Fnod_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0001 
Symbol 
ID5452031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp43 
End bp1377 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content33% 
IMG OID640873751 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_001409531 
Protein GI154248706 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000143167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAA GAGGTGAAAA AATTCTCTCA TTACTAAAAG AAAGGATAAG TAGACAACAA 
TGGGAAAGCT GGTTCATTGA TTTCACAGTT AAATCGGTTA TAGAAAACCA TGTGATATTT
GAAGTGGGAA ATATGTTTAT TAAAGGTTAT ATCGAGAAGA AGTTCGACAA GATAATAAGA
AAGGTTCTAT ATGAAGTTTT GGGTCCGAAT TCTACCTATG AAATAGTATA CGCTCAGGTA
CAGAAAGATG AGGTCGCAAA TAACGATAAT GGTGCGCTTG TAAGAAAAAG GCCCGTTCTT
ATTACACCTG TGAGTTCCAG ATATACTTTT AGCAATTTTG TTGTTGAAGA ATTCAACCAG
CTTGCTTACA CTATCCTTCT TGAGTCAGCT AAGAAACTTG GAACCTTCAA CCCTATATTT
ATTTACAGTA AAGCTGGTAT GGGAAAAACA CACTTGGTAC AAGCTTTCGG AAATTATTTG
CTTGAAAACG ATCCAGATAT TAGATTTGCT TATTTGACAA GTGAAGCCTT TATGAACGAA
TTAATCGCAA AGCTTAAAGC AGGTACAGTG GAAGAGTTTA GAGAGAAGTA CAGAAAGAAA
GTAGATGTAT TGGTAATAGA TGATATCCAA TTTCTTGCTG GAAAGAAAGG TGTACAGATA
GAACTTTTCC ACACTTTCAA TACTTTGTAT GAAGCAGGAA AACAGATAAT AGTTTGTTCT
GACAGATCAC CAAAAGAACT TAAAGATTTT CAAGATAGGG TAATTTCAAG GTTCCAGATG
GGCGTCGTTG TTGAGATAAA AAACCCGTCG GTTGAAGCAA TGTACCGTAT AGCAAAGAAA
ATCGTCGAAG ATGAAAAAGC CGATATTTCT GATGATATAT TAAATTACGT AGCGAAACAT
TTTAAAGGAA GTATAAGAAT TCTCAAAGGG GCTATAATTA AACTAATTGC ATATAAGAGC
ATGTACAAGG ATTTAGATGT TGCAACAGCA AGATTAATAC TAAAAGATTT TTTAACTGAA
GAGGAAGAAA ATCATGAACA GAATGATATA ATAAGTATCG TGGCTAGGTA TTTTAAACTT
TCTAAAGAAG ATTTGCTGTC GAATAAGAAG AGTAAAAATA TTGTAGTCGC AAGGCATCTA
GCGATGTACA TTTTAAGTAC AAAATTTCAA ATGTCATCAA GAAAAATCGC TACTTTACTT
AAAAAAAGTC ACCCTACAGT ATTAAATGGT ATAAAGGCTA CAGAGAACAG GCTAGAAAAC
GATCCAGAAA TTCGACAAAT TTTAAAACTA ATAGAAGATA ATTTAGCACA AATGGTAGGT
AAAGCATTAT CTTAA
 
Protein sequence
MSSRGEKILS LLKERISRQQ WESWFIDFTV KSVIENHVIF EVGNMFIKGY IEKKFDKIIR 
KVLYEVLGPN STYEIVYAQV QKDEVANNDN GALVRKRPVL ITPVSSRYTF SNFVVEEFNQ
LAYTILLESA KKLGTFNPIF IYSKAGMGKT HLVQAFGNYL LENDPDIRFA YLTSEAFMNE
LIAKLKAGTV EEFREKYRKK VDVLVIDDIQ FLAGKKGVQI ELFHTFNTLY EAGKQIIVCS
DRSPKELKDF QDRVISRFQM GVVVEIKNPS VEAMYRIAKK IVEDEKADIS DDILNYVAKH
FKGSIRILKG AIIKLIAYKS MYKDLDVATA RLILKDFLTE EEENHEQNDI ISIVARYFKL
SKEDLLSNKK SKNIVVARHL AMYILSTKFQ MSSRKIATLL KKSHPTVLNG IKATENRLEN
DPEIRQILKL IEDNLAQMVG KALS