| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5083 |
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| Symbol | |
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| ID | 5420461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | - |
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| Start bp | 305091 |
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| End bp | 306023 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640873737 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_001409517 |
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| Protein GI | 154243944 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.521585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAAG TCTTCTCGTT CCTCGATAAC CAGTTCAAGA CGCCGCTCGA GGACTTCATC
AGCTCGGGGA CATCGGGGAT CAGCTCCTGG GTGACGGGGC CGCTGACCAT CGCGCTGACG
CTTTATGTCA TCCTCTACGG CTTCCTCGTC CTGCGCGGCT CGATTCCCGA GCCGATCATG
GAATTCGCAT TCCGGGCGAT GAAGCTCGCC ATCATCCTGA TGCTGGTGCA GAACGCCTCG
AATTATCAGA CCTATGTCTC GAAGGTGTTC TTCGAGGATT TGCCCACTGA GATCTCCGGC
GCCCTCAACA CCGGCTCGGC GCCGAGCGCC TCCGCTTTCG ATTCCCTCCT CGACAAGGGG
CAAAAATCCG CCAACGACAT CTGGGCGAAA GGGTCCTGGC CGGTCGACAT CCTAACCGGC
GCGGCAGGGC TCGTGGTCAT CGTCATGACC TTCATCGTCG CGGCGATTGG CTATGTGGTG
TCGCTCTATG CCCGCGTCGC GCTCGCCATC GTCCTCGCCA TAGGTCCGAT CTTCGTCGCG
TTGGCCATGT TCCAGTCGAC GCGGCGGTTC ACCGAGGCGT GGATCGGCCA GATGGCAAAC
TTCGTCATCC TGCAGGTGCT CGTCGTCGCG GTGGGATCGC TCCTGGTGAC CTGCCTCGAT
GCCACCTTCG CCACCATGGA ATCCTATGCG GACGTGCTGA TGCGTCCGAT CGCGCTCGGC
GCCATCGCGC TTTCCGCTCT CTACGTCTTC TACCAGCTCC CCGGCATCGC GTCCGCGCTT
GCCGCAGGCG GAGCATCACT GACCTACGGC TACGGCGCCG CGCGCGACGC GCATGAAGGC
ACGATCGCCC GGAGCACCCG GTATGCGGCC CGCGCCGTCG GCCGGGGTGT CCGCGCGGCG
GGACGTAACT TCGGATCGGG CGGGGCTGGG TGA
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| Protein sequence | MYQVFSFLDN QFKTPLEDFI SSGTSGISSW VTGPLTIALT LYVILYGFLV LRGSIPEPIM
EFAFRAMKLA IILMLVQNAS NYQTYVSKVF FEDLPTEISG ALNTGSAPSA SAFDSLLDKG
QKSANDIWAK GSWPVDILTG AAGLVVIVMT FIVAAIGYVV SLYARVALAI VLAIGPIFVA
LAMFQSTRRF TEAWIGQMAN FVILQVLVVA VGSLLVTCLD ATFATMESYA DVLMRPIALG
AIALSALYVF YQLPGIASAL AAGGASLTYG YGAARDAHEG TIARSTRYAA RAVGRGVRAA
GRNFGSGGAG
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