| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5079 |
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| Symbol | |
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| ID | 5420472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | - |
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| Start bp | 302070 |
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| End bp | 303230 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640873733 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001409513 |
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| Protein GI | 154243940 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.454831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.261339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACG ATATCGAAAG CGGCGTGCCG GGAGAGCGTG GTCAGTCCGT CACTGGACGG
CGGCAAGACA ACCCGCTCCT GAAACGCGGA GCGGTGGTGC TGGCCGTCAT CGCATTCGTC
GGCTTTGCCC TGTGGTCGAT GCGAGATCGA GGACCGCGGA CGGACGCTGA GAAGCCCGAG
CGTGTCGTCA TCCGGCAGAC CTCGGCTTTT GAGCCGGCCC GCCAGCCTGC GGCCATGCCG
GAGGTGAAGC TGCCGACGCC GGTCGTCACG CCGCAAGCCG CCCCGGCGGA CGACCCGTTG
CTCGACGCCG CCCGCCGCGC TCCGGTGATG GCGTACGGGG CACAGCGCGG CCCACAGAAC
CGGCAACAAG CTGCCGGCGC TCCGCCTGAC GTCAACTCCA ACTATGTACC CCTGAATGGC
GCTGGAGGCG GCTTCAACGG GCCGGGCGAG AATGAGGACC GGCGTTTCGG CCGCATGATG
ACGCCGACCC GCCTCGAAGG GTCACGGGCG GGCACCCTGG GCAATCGTGA TTTCATCATC
GCCATGGGCA CGTCGATCCC GTGCGTCCTT GAGACCGCCT TGTCCTCGGA TCAGCCCGGC
TTCGCCAGCT GCGTCATCAA TCGCGACGTG CTCTCGGACA ATGGCCGTGT CGTCATGTTG
GAGAAGGGCA CGCAGGTCGT GGGCGAGTAC CGTGGTGGCC TGCGCCGCGG GCAGGCCCGC
CTCTTCGTAC TGTGGAATCG GGCCAAGACA CCGAAAGGCG TGATCATCAC CCTCGCATCA
CCGGCCACCG ACGCCTTGGG CCGGGCCGGC ATGGACGGCT ATGTCGACAC TCATTGGTGG
GAGCGCTTCG GCAGCGCTCT GCTGCTTTCG ATTGTTGGCG ACGCCGCCAA CTACGCCCAG
GGCCAGCTCC AGCAGGGCGA CATCCAAGTC CAGAACAGCG CCAATGCCGG CCAGCAGGCG
GCCGCCATCG CGGTCGAGCA GTCCATCAAC ATCCCGCCGA CGCTGGAGAA ACACCAGGGC
GAGTTGGTGT CGATCTTCGT CGCCCGGGAC CTGGATTTCT CTGGCGTCTA CGGTCTGCGC
GTCACCGAGC CGCGCAACAC GATCTACGAT CGCGGCGTGC TCGGCGACTT CAGCCGGCGT
TCGACGCTCG TCACAAAATA G
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| Protein sequence | MADDIESGVP GERGQSVTGR RQDNPLLKRG AVVLAVIAFV GFALWSMRDR GPRTDAEKPE
RVVIRQTSAF EPARQPAAMP EVKLPTPVVT PQAAPADDPL LDAARRAPVM AYGAQRGPQN
RQQAAGAPPD VNSNYVPLNG AGGGFNGPGE NEDRRFGRMM TPTRLEGSRA GTLGNRDFII
AMGTSIPCVL ETALSSDQPG FASCVINRDV LSDNGRVVML EKGTQVVGEY RGGLRRGQAR
LFVLWNRAKT PKGVIITLAS PATDALGRAG MDGYVDTHWW ERFGSALLLS IVGDAANYAQ
GQLQQGDIQV QNSANAGQQA AAIAVEQSIN IPPTLEKHQG ELVSIFVARD LDFSGVYGLR
VTEPRNTIYD RGVLGDFSRR STLVTK
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