| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5072 |
|---|
| Symbol | |
|---|
| ID | 5420354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009717 |
|---|
| Strand | - |
|---|
| Start bp | 295649 |
|---|
| End bp | 296638 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640873726 |
|---|
| Product | coenzyme A transferase |
|---|
| Protein accession | YP_001409506 |
|---|
| Protein GI | 154243933 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000990125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.375198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA CGCAAACGAT AACGACGAAT CGCCGGCCGA TGCCCTCCGC GGTCTGGACC
AGCCCGGACA AACGGCGCGG CCTCAACGAC CTCGCCGGCA AAGTGAAGGA CGGCGACGTG
GTCGCGGTCG GCGGCGGTTT GTCCTCCCGC GTGCCGATGG CGATTTTGCG CGCGGTGCTG
CGTCGCAAGG TGCGCAACCT CACCGTCGCC GGCTCGGCGC ACGGCATCGA TATCGACTTG
CTGTGCGGCG CTGGGGCGGT GTCCTGCAGC AGCGAAAGCT ACGTCGGGTT CGAGCAGGAC
TTTGGAATCG CGCCGAACTA CCGACGCGCT TGCGAATCGG GAGAAGTCCG AATCGACGAC
AGTTGCTGCT ACACGGTGGT TCAACAATTG CGCGCCGCCG TGGCGGGCCT GCCCTTCATG
CCGATGCGCT CGGCGCGAGG CACCAGCTTT CCCGGCCTGC ACCCCGAATA CAAGACCATG
ATCTGCCCCT ACACTGGCGA GGAACTGCTG CTGGTGCCGG CGCTGATCCC GGATATCGCG
ATCCTGCATG CGCAATACGG CGACGCGCAG GGCAATCTGC GCATCGAGGG GCCGCCGGTC
CTTGATCCTT TGTTCGCCAA GGCTTCACGC ATGGTGATCG CCTCGGTCGA AGAGATCGTG
CCGACCGAGC GCCTAGTCGA ACTCGGCGGC ATCACTATCC CCTATTTCTA TGTCAGCGCC
GTCGCCGAAG TGCCGATGGG CGCACACCCG ACGGCCTGCT ATCCGTTCTA CGCCTACGAT
AGGGCGCACA CCGCAGCCTA CTACGCCGCT GCCCGCGGCG GCGCGGGGAC CTTCAACACC
GACTACCTTG AGCCCTTCGT GCTTGGTTGC GCCGACCACG CCTCCTATCT GCGGCGGATC
GGCGGCGATG AGACCCGCCG GCGCCTCGCC ACCTGGTCGG AAGGGACCGA GGCCTGGATG
TCGCTCTATC GCGAGGAGGC ATTGACATGA
|
|---|
| Protein sequence | MSNTQTITTN RRPMPSAVWT SPDKRRGLND LAGKVKDGDV VAVGGGLSSR VPMAILRAVL
RRKVRNLTVA GSAHGIDIDL LCGAGAVSCS SESYVGFEQD FGIAPNYRRA CESGEVRIDD
SCCYTVVQQL RAAVAGLPFM PMRSARGTSF PGLHPEYKTM ICPYTGEELL LVPALIPDIA
ILHAQYGDAQ GNLRIEGPPV LDPLFAKASR MVIASVEEIV PTERLVELGG ITIPYFYVSA
VAEVPMGAHP TACYPFYAYD RAHTAAYYAA ARGGAGTFNT DYLEPFVLGC ADHASYLRRI
GGDETRRRLA TWSEGTEAWM SLYREEALT
|
|---|
| |