Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1968 |
Symbol | |
ID | 5406244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 1078825 |
End bp | 1080345 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640872515 |
Product | type II and III secretion system protein |
Protein accession | YP_001408333 |
Protein GI | 154174515 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.150823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCAT TAAAATCAAA TAAGATCAAA TTCATAGCGG CTATTTTGCT GCTGTCTTTA AGTTTCGTAG GTGCGCAGGC AAAAGCTAGC AGCTGTCTGG GTAAAAATTT CAGTATGAAA ATTTCAGACG ATATCGCGCT TGGCGACGTG CTAAATCAAC TATCCGATAT GTGCGACTTT AGCATCGTGG CAAAAGATAA TCTTAGCAAA CAAGAGCTGA AGGATCACGT TTTTGGCGTG AATATCAGGA ATATGTCTTT AAACGAAGTC TTTGACTTGT TGCTAAACGA GAAAAATTTA AGCTATGAAT TTTCAAATAA CGTATTAAAA ATCTCATCGC TGCAAACAAG GATATTTAAA ATCGACTATA TAACCTCCGT CCGCGAGGGC ACAGCGGTGA CAAAGGCCTC GGTAGACGCC TCTCCTGTCG AAGTGGGCGA TGAAAAAGAC GATGCTGAGG GCGGCGATAT CCAAAACTCG AACAATCTGA TAAGAAGCGT AGAGAAATTC GACTTTTGGG AGAAGCTAGA CACCGAGCTT AAGGCGATAC TAAACAACAC GAGCGAGCAT GTATCTGCGC CAGATCCTAT CATCAACTCA AATGCCGGTC TCATCACGGT CACAGGCACC CCATCTCAGC TAAGGCGTGT CGAGAGCTAT ATAAACGAGG TGCAAAGGCG CCTTAAAAAA CAAGTCATCA TAGACGTTTC TATCATCGCA GTCGATCTAA ACAACGAATA TAAACAAGGC GTGGATTGGA GCAAATTCGA GCTTGGTTTC AACTCATACT TAGGCGGCGA TCCGACTAAG CCATCAAATG CTGGCTGGAA CAATAGAGGC AACGGCCTGA GCGCTGGCTT TGGTCAGACG TTAAACATCG CGGCGAATTT AAATTTCAGT CTTGACGGGA TGATGAATTT CTTGGAGACC AACGGCAAAG CCAAGGTCAT CTCAAGCCCG AAAGTGACGA CTCTAAACAA CCAACAAGCC CTGATATCAG TGGGCGATAA CATAAACTAC CGCGTCATGG AGCAAACAGA CAGCGCCAAC GCACTAAACG ACAGGGTAAA GACGACTTAC AAACAATATT CCGTTTTTAT AGGAATTTTG CTAAATTTAC TCCCGGAAGT GTCTGACAAC AACAAGATCA TGCTTCGCAT AAATCCGTCG CTAAGTAGTT TCAAATACCA AGAAGACGAC GTCAGAGCCC AAAATACAAA CATCAGAGAG ATAGCTCCCG ATACGATACA AAAGAAGCTC TCGACAGTCG TTCAGGTAAA TAGCGGCGAT ACGATCGTGC TTGGCGGGCT TATCGGTCAG ACAAAAAATA AGCAAAATAC GGCCGTACCT ATCTTGGCGG ATATCCCGCT ACTTGGAAAT GCCTTTAAAA GCACGAAAGA TGCGGTCAAA ACGACAGAGC TGATATTTGT GATAACGCCT AGGGTCGTCG ATCTAGACGG TGCTAAACCG GTTCAGCAAT CGCTTAAAGA TTTAGGATTT TCAAAGTCGA TTTATGAGTA A
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Protein sequence | MLALKSNKIK FIAAILLLSL SFVGAQAKAS SCLGKNFSMK ISDDIALGDV LNQLSDMCDF SIVAKDNLSK QELKDHVFGV NIRNMSLNEV FDLLLNEKNL SYEFSNNVLK ISSLQTRIFK IDYITSVREG TAVTKASVDA SPVEVGDEKD DAEGGDIQNS NNLIRSVEKF DFWEKLDTEL KAILNNTSEH VSAPDPIINS NAGLITVTGT PSQLRRVESY INEVQRRLKK QVIIDVSIIA VDLNNEYKQG VDWSKFELGF NSYLGGDPTK PSNAGWNNRG NGLSAGFGQT LNIAANLNFS LDGMMNFLET NGKAKVISSP KVTTLNNQQA LISVGDNINY RVMEQTDSAN ALNDRVKTTY KQYSVFIGIL LNLLPEVSDN NKIMLRINPS LSSFKYQEDD VRAQNTNIRE IAPDTIQKKL STVVQVNSGD TIVLGGLIGQ TKNKQNTAVP ILADIPLLGN AFKSTKDAVK TTELIFVITP RVVDLDGAKP VQQSLKDLGF SKSIYE
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