Gene CCV52592_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_1968 
Symbol 
ID5406244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp1078825 
End bp1080345 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content44% 
IMG OID640872515 
Producttype II and III secretion system protein 
Protein accessionYP_001408333 
Protein GI154174515 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02519] pilus (MSHA type) biogenesis protein MshL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCAT TAAAATCAAA TAAGATCAAA TTCATAGCGG CTATTTTGCT GCTGTCTTTA 
AGTTTCGTAG GTGCGCAGGC AAAAGCTAGC AGCTGTCTGG GTAAAAATTT CAGTATGAAA
ATTTCAGACG ATATCGCGCT TGGCGACGTG CTAAATCAAC TATCCGATAT GTGCGACTTT
AGCATCGTGG CAAAAGATAA TCTTAGCAAA CAAGAGCTGA AGGATCACGT TTTTGGCGTG
AATATCAGGA ATATGTCTTT AAACGAAGTC TTTGACTTGT TGCTAAACGA GAAAAATTTA
AGCTATGAAT TTTCAAATAA CGTATTAAAA ATCTCATCGC TGCAAACAAG GATATTTAAA
ATCGACTATA TAACCTCCGT CCGCGAGGGC ACAGCGGTGA CAAAGGCCTC GGTAGACGCC
TCTCCTGTCG AAGTGGGCGA TGAAAAAGAC GATGCTGAGG GCGGCGATAT CCAAAACTCG
AACAATCTGA TAAGAAGCGT AGAGAAATTC GACTTTTGGG AGAAGCTAGA CACCGAGCTT
AAGGCGATAC TAAACAACAC GAGCGAGCAT GTATCTGCGC CAGATCCTAT CATCAACTCA
AATGCCGGTC TCATCACGGT CACAGGCACC CCATCTCAGC TAAGGCGTGT CGAGAGCTAT
ATAAACGAGG TGCAAAGGCG CCTTAAAAAA CAAGTCATCA TAGACGTTTC TATCATCGCA
GTCGATCTAA ACAACGAATA TAAACAAGGC GTGGATTGGA GCAAATTCGA GCTTGGTTTC
AACTCATACT TAGGCGGCGA TCCGACTAAG CCATCAAATG CTGGCTGGAA CAATAGAGGC
AACGGCCTGA GCGCTGGCTT TGGTCAGACG TTAAACATCG CGGCGAATTT AAATTTCAGT
CTTGACGGGA TGATGAATTT CTTGGAGACC AACGGCAAAG CCAAGGTCAT CTCAAGCCCG
AAAGTGACGA CTCTAAACAA CCAACAAGCC CTGATATCAG TGGGCGATAA CATAAACTAC
CGCGTCATGG AGCAAACAGA CAGCGCCAAC GCACTAAACG ACAGGGTAAA GACGACTTAC
AAACAATATT CCGTTTTTAT AGGAATTTTG CTAAATTTAC TCCCGGAAGT GTCTGACAAC
AACAAGATCA TGCTTCGCAT AAATCCGTCG CTAAGTAGTT TCAAATACCA AGAAGACGAC
GTCAGAGCCC AAAATACAAA CATCAGAGAG ATAGCTCCCG ATACGATACA AAAGAAGCTC
TCGACAGTCG TTCAGGTAAA TAGCGGCGAT ACGATCGTGC TTGGCGGGCT TATCGGTCAG
ACAAAAAATA AGCAAAATAC GGCCGTACCT ATCTTGGCGG ATATCCCGCT ACTTGGAAAT
GCCTTTAAAA GCACGAAAGA TGCGGTCAAA ACGACAGAGC TGATATTTGT GATAACGCCT
AGGGTCGTCG ATCTAGACGG TGCTAAACCG GTTCAGCAAT CGCTTAAAGA TTTAGGATTT
TCAAAGTCGA TTTATGAGTA A
 
Protein sequence
MLALKSNKIK FIAAILLLSL SFVGAQAKAS SCLGKNFSMK ISDDIALGDV LNQLSDMCDF 
SIVAKDNLSK QELKDHVFGV NIRNMSLNEV FDLLLNEKNL SYEFSNNVLK ISSLQTRIFK
IDYITSVREG TAVTKASVDA SPVEVGDEKD DAEGGDIQNS NNLIRSVEKF DFWEKLDTEL
KAILNNTSEH VSAPDPIINS NAGLITVTGT PSQLRRVESY INEVQRRLKK QVIIDVSIIA
VDLNNEYKQG VDWSKFELGF NSYLGGDPTK PSNAGWNNRG NGLSAGFGQT LNIAANLNFS
LDGMMNFLET NGKAKVISSP KVTTLNNQQA LISVGDNINY RVMEQTDSAN ALNDRVKTTY
KQYSVFIGIL LNLLPEVSDN NKIMLRINPS LSSFKYQEDD VRAQNTNIRE IAPDTIQKKL
STVVQVNSGD TIVLGGLIGQ TKNKQNTAVP ILADIPLLGN AFKSTKDAVK TTELIFVITP
RVVDLDGAKP VQQSLKDLGF SKSIYE