| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1903 |
|---|
| Symbol | |
|---|
| ID | 5406857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1039056 |
|---|
| End bp | 1040201 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640872477 |
|---|
| Product | thymidylate kinase (dTMP kinase) |
|---|
| Protein accession | YP_001408296 |
|---|
| Protein GI | 154175192 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0537168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATA ACATACATGA AAAGGCAAAT AGGCGTCTAA ACGAGCTTAG TCTTTTACCA
AAGATCAAAG AAAACGGCAC TATTGCGAAA ATTTTAGAGC AAAATGGCTT CACAAGGCGT
GATTTTATGA AATGGGCGGG AGCGATGACC GCGTTCATGG CGCTTCCGGC TTCGATGACA
CCGCTCGTTG CGCGTGCAGC CGAGCTTAGC GACAGACTGC CTGTCATTTG GCTGCATATG
GCAGAGTGTA CCGGCTGTAG CGAGAGCTTG CTCCGTACCG ACGCACCTAG TATCGATAGC
CTCATCTTCG ACTACATCAG CCTTGAGTAT CACGAGACGA TCATGGCGGC TGCAGGCTGG
CAGGCAGAGG AAAATTTAGA GAGTGCGATC GAAAAATACA AAGGTCACTA CGTCTTGCTT
GTGGAAGGTG GCATCCCTAC CGGCGAGACG GAGAATTTTC TGACCGTCGG ACCGCATGGA
ACGACAGGTA AAACGCATGC CGTTCACGCT AGCGAAAATG CAGCTGCGAT ATTTGCCATC
GGCACCTGTT CCAGCTTTGG CGGTATCCAA GCGGCCAAGC CAAATCCTTC AAATGCCGTT
AGTCTAGGCA AAGTCACAAG CAAGCCGGTG ATCAACGTCC CAGGCTGTCC TCCAAGCGAG
AAAAATATCG TCGGCAACGT GCTTCATTTC ATTTTATTTG GTACGCTTCC CGCACTTGAT
GTATTTAACA GACCAAAATG GGCTTATGGC CTTAGAATTC ACGATCTGTG CGAGCGTCGC
GGTCACTTTG ACGCGGGCGA ATTCGTCCAA GCCTTTGGCG ATGAGGGCGC TAAAAACGGC
TACTGCCTTT ACAAAGTAGG CTGTAAAGGG CCATATACCT TCAATAACTG CTCGCGCGAA
AGATTCAACC AACACACCAG CTGGCCAGTG CAGGCCGGTC ATGGCTGTAT AGGCTGCTCG
GAGCCCGATT TTTGGGATAC GATGGGACCT TTTGAGGAGC CGATGGGCGA TAGGCTTTTT
GACACCGTTT TGGGTCTAGG AGCCGATAAC GTCAGCGACA AGATAGGCAT AGGGATTTTA
GCGCTCGCAG GCATCGGTAT AGCCGCGCAT GCAGCGATAG CAGCCATGAG CAAAGATAAA
GAATAA
|
|---|
| Protein sequence | MVHNIHEKAN RRLNELSLLP KIKENGTIAK ILEQNGFTRR DFMKWAGAMT AFMALPASMT
PLVARAAELS DRLPVIWLHM AECTGCSESL LRTDAPSIDS LIFDYISLEY HETIMAAAGW
QAEENLESAI EKYKGHYVLL VEGGIPTGET ENFLTVGPHG TTGKTHAVHA SENAAAIFAI
GTCSSFGGIQ AAKPNPSNAV SLGKVTSKPV INVPGCPPSE KNIVGNVLHF ILFGTLPALD
VFNRPKWAYG LRIHDLCERR GHFDAGEFVQ AFGDEGAKNG YCLYKVGCKG PYTFNNCSRE
RFNQHTSWPV QAGHGCIGCS EPDFWDTMGP FEEPMGDRLF DTVLGLGADN VSDKIGIGIL
ALAGIGIAAH AAIAAMSKDK E
|
|---|
| |