| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1881 |
|---|
| Symbol | sucD |
|---|
| ID | 5406852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1015896 |
|---|
| End bp | 1016768 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640872457 |
|---|
| Product | succinate-CoA ligase subunit alpha |
|---|
| Protein accession | YP_001408276 |
|---|
| Protein GI | 154174472 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00611204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATAT TGATAGATAA AAATACACGC GTCATAGTGC AGGGTATCAC AGGTAAGGAG
GGCAGCTTTC ATACTCAAAG CTGCATGGAC TATGGCACGC AGATAGCTGC CGGTGTGACG
CCGTTTAAAG GCGGACAGAC GCATCTTGGC GTTAAAATTT ACAACACCGT GAAAGAAGCC
AAAGACGCTA GCGGGGCGGA TGCTAGTATG ATATTCGTGC CGGCCGGCTT TTGCAAAGAC
GCTATCATCG AGGCTGCAGA CGCGGGCATA AAGCTATGCG TCGTAATAAC CGAACATGTA
CCGGTGCTTG ACATGCTCGC GGCAAAGGCC TACGCGAACA AGCGTGGTAT GAAGATCATA
GGGCCAAACT GTCCGGGCGT CATAAGCGCC AACGAGTGTA AGCTGGGCAT CATGCCAAGT
GCAGTGTTTA AAAGAGCGAG CCTAAATATC GGCATCATCT CAAAGTCGGG CACTCTCACG
TACGAGGCGG CAAATCAAAT CTGCGAGCAA GGATATGGGA TCTCAACGGC CATCGGTATC
GGCGGAGACG CGGTCATCGG TATGGCTTAT GATGAGATTT TGCCCCTTTT TGATGAGGAC
GAGGATACTA AAGCCGTCGT GATGATAGGC GAGATAGGCG GTGAGCTCGA GAGTAGAGCC
AGTCAGATCA TTGAAAATTT CAAAAAGCCA ATCGTCGCTT TCATAGCCGG TGCCAGTGCG
CCCGAGGGAC GTAAAATGGG ACACGCCGGA GCGATAATAA ACTCCAAAAA CGCGAGTGCG
AAGGCTAAAT TTGAAGTCTT GAGAGCAGCC GGCGCTCATA TCGTCACGAA TCCCGCAAAA
ATAGGCGAAA AACTAAAAGA GATATTAGGA TGA
|
|---|
| Protein sequence | MSILIDKNTR VIVQGITGKE GSFHTQSCMD YGTQIAAGVT PFKGGQTHLG VKIYNTVKEA
KDASGADASM IFVPAGFCKD AIIEAADAGI KLCVVITEHV PVLDMLAAKA YANKRGMKII
GPNCPGVISA NECKLGIMPS AVFKRASLNI GIISKSGTLT YEAANQICEQ GYGISTAIGI
GGDAVIGMAY DEILPLFDED EDTKAVVMIG EIGGELESRA SQIIENFKKP IVAFIAGASA
PEGRKMGHAG AIINSKNASA KAKFEVLRAA GAHIVTNPAK IGEKLKEILG
|
|---|
| |