| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1665 |
|---|
| Symbol | lysA |
|---|
| ID | 5407220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1628879 |
|---|
| End bp | 1630078 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640873088 |
|---|
| Product | diaminopimelate decarboxylase |
|---|
| Protein accession | YP_001408878 |
|---|
| Protein GI | 154174502 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTA ATGAGCTCGC TCGCGAATAT GGCACCCCGC TTTACGTTTA TGATTTCGAC
TACATAACAA ACCGCTACAA TATGCTAAAA GACGCATTTT CAGCTAGAAA ATCCCTGATC
TGCTATGCCG TTAAGGCAAA TTCGAATTTA AGCGTTTTAA AGCTCTTAGC ATCTCTTGGG
GCGGGATTTG ATTGTGTCAG TATCGGCGAG GTCAGGCGAG CGCTCTTAGC CGGAGCTAAA
AAATATCAGA TTATCCTAAG CGGTGTAGGT AAGCGCGACG ATGAGCTAGA AGAAGCGCTA
AAAAGCGATA TCTTGATGAT AAATTTAGAG AGCGAGGCCG AGATGTATCG CCTCGAAGAT
ATCACAAAAA AGCTAAATTT AAAGGCTCGT ATAAGTATCC GCGTAAATCC TGACGTAGAC
GCCAAAACTC ATCCTTATAT CTCGACAGGA CTAAATGAAA ATAAATTTGG CGTCGATATA
AACACCGCGA AAAAAATGTA TATCCATGCG AAAAATTCAG CCGCTCTCGA GCCCGTGGGA
GTGCATTTTC ACATCGGCTC GCAGCTAACA AATATCGAGC CTATCATCGA GGCTGCAGGC
ATCGTGAGCG AGCTGATGCG CGAGCTAAAA GCGCTTGAGA TAGATATAAA ATTCTTTGAC
GTGGGTGGCG GCATAGGCAT CATCTATCAA AACGAGACCG ACATCAGCCT ATACGACTAC
GCGCAAGGGA TATTAGCCAA GCTTGGCGGC CAGGACGTGA CGATAGTCTG CGAGCCAGGA
CGCTTCATCG TGGGAAACGC CGGATATTTT CTAACCAGCG TTTTATATGA GAAATTCAAC
AAACAAAAGC GCTTCATCAT CGTAGACGGA GCGATGAACG ATCTCATACG TCCAAGCCTA
TACGGCGCCT ATCACGGTAT AAGCGTCGTG GGTAAAAACA CTAGTGCGGG GGCTTGCGAC
GTGGTCGGAC CTATCTGCGA GAGCGGCGAT TTTTTCGCTA AAAATTTAAA TTTACCCGCT
TGCGAGAGCG GCGATATCAT CGTTATAAAA AGTGCCGGAG CTTACGGATT TAGCATGAGT
TCAAACTACA ACTCTCGTGC ACGCGCAGCC GAAGTCGCGG TGCAGGACAA AGCTCACAGA
CTGATTAGAA AGCGCGAAAA TTTCGAGGAT ATAATCGCGC TTGAAAAAGA ATTCATATAA
|
|---|
| Protein sequence | MDFNELAREY GTPLYVYDFD YITNRYNMLK DAFSARKSLI CYAVKANSNL SVLKLLASLG
AGFDCVSIGE VRRALLAGAK KYQIILSGVG KRDDELEEAL KSDILMINLE SEAEMYRLED
ITKKLNLKAR ISIRVNPDVD AKTHPYISTG LNENKFGVDI NTAKKMYIHA KNSAALEPVG
VHFHIGSQLT NIEPIIEAAG IVSELMRELK ALEIDIKFFD VGGGIGIIYQ NETDISLYDY
AQGILAKLGG QDVTIVCEPG RFIVGNAGYF LTSVLYEKFN KQKRFIIVDG AMNDLIRPSL
YGAYHGISVV GKNTSAGACD VVGPICESGD FFAKNLNLPA CESGDIIVIK SAGAYGFSMS
SNYNSRARAA EVAVQDKAHR LIRKRENFED IIALEKEFI
|
|---|
| |