Gene CCV52592_1501 details

Gene Information

• Locus tag: CCV52592_1501
• Symbol: def
• ID: 5406823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 139566
• End bp: 140090
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640871598
• Product: peptide deformylase
• Protein accession: YP_001407439
• Protein GI: 154175184
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.965854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTCTTAG AAATTTTATC TTACCCGAAC AAAAAGCTTT ACGAGGTCTC AAAAGAGGTC 
GAGACCTTTG ACGAGGAGCT GCATAAACTG CTTGATGATA TGTATGAGAC GATGATAGCA 
AAGGACGGCA TCGGTCTAGC GGCGATTCAG GTGGGCGTCG CAAAACGGAT ATTCATCGTA 
AATTTAAGCA ACGAAGAGGG CGTGCAGGAT AAGGCTGATC TCATCGAGAT CATCAATCCT 
GAATTTGAGC TAAAAGTCGG CGAGTGCGTC TATCAGGAGG GCTGCCTCAG CGTACCGGGC 
TTTTACGAAG ATGTCAAGCG TGCCGAGCGC GTCAAGATAA AATTTCAAGA TCGCTTCGGG 
CAGGAGCGCC AGATCGAGAC GGACGGGCTT CTAGCCGTTG CCTTGCAGCA CGAAAATGAC 
CACCTCGACG GACATCTTTT CATCGAAAAG ATTGGCTACA ACAAACGTAA AAAATTCGAA 
AAAGAATACA AAAGCAAAAA GAATAAAAAA GAACACAGAT TATGA 

 

Protein sequence

MVLEILSYPN KKLYEVSKEV ETFDEELHKL LDDMYETMIA KDGIGLAAIQ VGVAKRIFIV 
NLSNEEGVQD KADLIEIINP EFELKVGECV YQEGCLSVPG FYEDVKRAER VKIKFQDRFG 
QERQIETDGL LAVALQHEND HLDGHLFIEK IGYNKRKKFE KEYKSKKNKK EHRL