Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1349 |
Symbol | lysS |
ID | 5406872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 511877 |
End bp | 513388 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640871955 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001407789 |
Protein GI | 154174894 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000670094 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATATTTG ACAACCAACT AGAAATCCAA AGGCTTGAAA CGGCTGAAAA TTTAAGAAAA ATGGGCGTAA ATCCATACCC GCACTTTCTA AGACGCGATA TGGACATAGC AAAATTTAGG CTCAAATTCG CTCACATCAT AAACACCGAA GACAAAAAAG CCGAAGGGCA GTATGTGAGC CTCGCCGGTC GTATCAAGCT CATTAGAGAC GCCGGCAAAG CGATATTTGC AAATATCGAG GACGAAAACG GAAATTTACA AATTTATTTT AGCAATAAAA CACTTGATTC GGAGTGGTTT AAGGTCGTAA AGAAAAACAT CGAAGTTGGC GACATCATCT ATGTGCGCGG CTATGCTTTC GTGACGCGAA CGGGTGAGTT TTCGATGCAT GTTAGCGAGC TAAATTTAGC CTCCAAGGCG ATCTCGCCTT TGCCTGAGAA ATTTCACGGA CTCGTGGATA TCGAGACTCG CTACCGACAA AGATACCTTG ATCTAATAAT GAATCCTGAG GTCAGAAGCG ACTTCAAAAA GCGCTCCATC ATCATCAGCA CCATACGCCG ATTTATTGAA GAGAAGGGCT TTTTAGAGGT CGAGACGCCG ATGATGCACC CGATCGCCGG CGGTGCGAAC GCAAAGCCGT TTGTCACCTT TCACAACGCC CTTGGTGTCA ATAGATACCT TCGTATCGCG CCCGAGCTTT ATCTAAAACG CCTCATCGTG GGTGGCTTTG AAGCCGTTTA TGACATGAAT AGAAATTTTA GAAACGAGGG CATGGATCTA ACGCACAATC CTGAATTTAC AAGCATAGAA TTTTACTGGG CGTATCACAC ATATCACGAT CTAATGGGGC TAACAGAGGA GCTATTTAAC GTGCTCATCG ACAAGCTAGA TCTACCAAAG GTCATTGAAT TTGACGGTAT GCAGGTTGAT TTTAGCAAGC CGTTTGCGAG GCTAAACTAC AAAAAAGCAC TCGTCGAGGT GGGCGGACTA GACCCGCAGA TCATAGAGGA TAAAGATAAA ATTTTAGCCA AGCTTAAAGC GGACGGCTTT GAAGCGAATG CAAAGCTCGA TCTCGGGCAT TTGCAAGCCG AGCTTTTTGA TAACTACGTC GAAGAAAAGC TCATAGATCC GACCTTCATC ATCGACTATC CGATCTCGAT CAGCCCGCTT TCAAGAAGGA GCGACAAAAA CCCTGAAATA GCCGAAAGAT TTGAGCTGTT TATCGCCGGA CGAGAGCTGG CAAATGGCTT TAACGAGCTA AACGACCCGG TTGATCAGTA TAACCGCTTT GCCGCCCAGA TCGAGGCTAA AAATGCAGGC GATGACGAAG CGCACGAGAT GGACGAGGAC TACGTTAGAG CACTTGGATA CGCGATGCCG CCGACTGCGG GCGAGGGTAT CGGCATAGAC CGCCTCGTGA TGCTATTAAC AAATAAAAAA TCTATCCGCG ACGTGGTGCT TTTTCCTGCG ATGCGTCCGC TAAAAAGTGA AATAAAGGAG AATGAAAAAT GA
|
Protein sequence | MIFDNQLEIQ RLETAENLRK MGVNPYPHFL RRDMDIAKFR LKFAHIINTE DKKAEGQYVS LAGRIKLIRD AGKAIFANIE DENGNLQIYF SNKTLDSEWF KVVKKNIEVG DIIYVRGYAF VTRTGEFSMH VSELNLASKA ISPLPEKFHG LVDIETRYRQ RYLDLIMNPE VRSDFKKRSI IISTIRRFIE EKGFLEVETP MMHPIAGGAN AKPFVTFHNA LGVNRYLRIA PELYLKRLIV GGFEAVYDMN RNFRNEGMDL THNPEFTSIE FYWAYHTYHD LMGLTEELFN VLIDKLDLPK VIEFDGMQVD FSKPFARLNY KKALVEVGGL DPQIIEDKDK ILAKLKADGF EANAKLDLGH LQAELFDNYV EEKLIDPTFI IDYPISISPL SRRSDKNPEI AERFELFIAG RELANGFNEL NDPVDQYNRF AAQIEAKNAG DDEAHEMDED YVRALGYAMP PTAGEGIGID RLVMLLTNKK SIRDVVLFPA MRPLKSEIKE NEK
|
| |