Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1313 |
Symbol | rpiB |
ID | 5407594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 665958 |
End bp | 666407 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640872104 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_001407936 |
Protein GI | 154174574 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000182185 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAG AAAAAATCTT CATCGCGAGC GATCATGCAG GTTTTGAGCT AAAAAACGAG CTAAAAACGA TCCTCTCAAA TTTAGGACAC GAAGTCATCG ATCTGGGAAC TAATGATGGC AAAACGAGCG TCGATTATCC TGATTTTGCA CATTCGATGG CTAAAAATTT AGCTTCTAAA TGTTACGGAG TGCTGATATG CGGCACCGGC ATCGGTATCA GCATCGCTGC AAACAGACAC CAAAATATCC GCTGCGCCCT TTGTCACGAC GAATTTACCG CTCGTCTAGC AAGAGAACAT AACGACGCAA ATGTGATAGC CTTTGGCGCC AGAGTCATCG GTGCTGGCGT GGCTGGCGAA ATGCTAAAGG TATTTTTTAG CACGGAATTT CAGGGTGGCA GACATGAGCG CAGAGTCGGT AAGATCGAGC CAAATAAGGA AATTTCATGA
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Protein sequence | MDIEKIFIAS DHAGFELKNE LKTILSNLGH EVIDLGTNDG KTSVDYPDFA HSMAKNLASK CYGVLICGTG IGISIAANRH QNIRCALCHD EFTARLAREH NDANVIAFGA RVIGAGVAGE MLKVFFSTEF QGGRHERRVG KIEPNKEIS
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