Gene CCV52592_1016 details

Gene Information

• Locus tag: CCV52592_1016
• Symbol: rpsE
• ID: 5406420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: -
• Start bp: 1888915
• End bp: 1889358
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640873357
• Product: 30S ribosomal protein S5
• Protein accession: YP_001409137
• Protein GI: 154174468
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000116786
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT ATAATAGAGA AGAATTTGAA GAAGTAATCG TCGATATCGG TCGGGTTACG 
AAGGTCGTCA AAGGCGGTCG TAGATTTAGA TTTACGGCTT TGGTCGTCGT AGGCAACAGA 
AACGGACTAG TCGGCTTTGG CTACGGTAAA GCAAAGGAAG TACCTGACGC GATGAGAAAA 
GCTATCGATG ATGCGTTTAA AAACATCATC CATGTCAAGC TCAAAGGCTC TACTATACCT 
CACGATGTAG AAGTCAAATA TAATGCAAGT AGAATTTTAC TTCGTCCGGC TAGCGAAGGT 
ACCGGTGTCA TCGCTGGTGG TGGTGCACGC CCTATTATCG AGCTTGCAGG TATCAAAGAT 
ATCCTTACGA AATCACTTGG CTCAAATAAC TCGGCAAACG TTGTCCGCGC AACTATAAAA 
GCGCTTAGTT TGCTAAAAAG CTAA 

 

Protein sequence

MEKYNREEFE EVIVDIGRVT KVVKGGRRFR FTALVVVGNR NGLVGFGYGK AKEVPDAMRK 
AIDDAFKNII HVKLKGSTIP HDVEVKYNAS RILLRPASEG TGVIAGGGAR PIIELAGIKD 
ILTKSLGSNN SANVVRATIK ALSLLKS