Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0947 |
Symbol | |
ID | 5407501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 539403 |
End bp | 540581 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640871981 |
Product | drug resistance transporter |
Protein accession | YP_001407815 |
Protein GI | 154174620 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAAAA AACACAATTC ACGATTATTT TTACTTCTAT TTTTAGGCGC TCTCTCGGCT TTTGGCCCCT TTGTGACCGA CCTTTATCTA CCGGCCCTAC CGTCGATCAC GACGTGGTTT GATACGAGCG TGTCGGCTAC CCAGCTCACG CTTAGCACAT CGATGGCCGG ACTTGCCATA GGACAGCTCA TAATAGGCCC TATCAGTGAT AAATTCGGCC GTAAAAGGCC GCTTACCATC TCGCTTATAA TCTACACGAT CAGTACCATT TGCATATTTT TTGCGCAAAG CATCGAAATT TTCATTTTTA TGCGTGTTAT TCAGGGACTT GCAAGTGCCG GAAGCCTCGT CATCTCGCGT GCAGTGGTGA GCGATCTATA CAGCGGTCAT GAGATGACGA AATTTTTTGG ACTGATGATG GTGATAAACG GCATCGCGCC GATCATCTCG CCTATCGGAG GCAGCTTTTT GCTGGAATTT ACCGACTGGC GAGGGATATT CGTGGTCCTA AGTATCATCG GCGTTTTGCT GTTTGTCGCG AATTTCAACT TCAAAGAGAG CCTGGACGAG CCTCGCCGTA TAAAAGCGCC TTTGCTCGAG ACCTACGGCG TTTATAAGCA AATTTTGATA AACAAAACGT TCATGCTCTT TGTCGCTATA CAAACTTGCG CGCTTGGCAC GATGTTTGCC TATATAGCGT GCTCGTCGTT CATTTTTCAA GATTTTTACG GACTTAGCTC GATGAGCTAT AGCGTGTGCT TCGCCTCAAA CGGCCTGGCC CTTGTCATCG GCTCGCGCAC GGCTAGCCTC TTAAAAGACA AGATGGCTCT AAGGATCGGC GTTTATGGTA TATTTGCCTC AAGTATCGTA GTGGGGCTTA TTTTGACGGC TAAATTTCAT GTTTATGCCG TTATAGTGGC GTTTTTCATC ATGCTTTTAT TTATCGGCTT CATCCTGCCT ACCGCATCGT CGCTAGCCAT GAATAGCGCC AGAAGATACG CCGGCTCGGC CTCCGCGGTG CTTGGATTTT GCCCGTTTTT CCTAGGCGGT ATCGTCTCGC CGCTAGTGGG GCTTGGCGAT ATTTTCTACT CCAGCTCGCT TACGATGCTT GTTTGCACGT TGCTTGCATT GACGGCGTTT TTTAAGGTGA TGAGGGGCGG ACACCTGCAA AATGGCTGA
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Protein sequence | MRKKHNSRLF LLLFLGALSA FGPFVTDLYL PALPSITTWF DTSVSATQLT LSTSMAGLAI GQLIIGPISD KFGRKRPLTI SLIIYTISTI CIFFAQSIEI FIFMRVIQGL ASAGSLVISR AVVSDLYSGH EMTKFFGLMM VINGIAPIIS PIGGSFLLEF TDWRGIFVVL SIIGVLLFVA NFNFKESLDE PRRIKAPLLE TYGVYKQILI NKTFMLFVAI QTCALGTMFA YIACSSFIFQ DFYGLSSMSY SVCFASNGLA LVIGSRTASL LKDKMALRIG VYGIFASSIV VGLILTAKFH VYAVIVAFFI MLLFIGFILP TASSLAMNSA RRYAGSASAV LGFCPFFLGG IVSPLVGLGD IFYSSSLTML VCTLLALTAF FKVMRGGHLQ NG
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