Gene CCV52592_0870 details

Gene Information

• Locus tag: CCV52592_0870
• Symbol: carB
• ID: 5407457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 246516
• End bp: 249779
• Gene Length: 3264 bp
• Protein Length: 1087 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640871708
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_001407544
• Protein GI: 154174995
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAA GAGATGATAT AAAAACGATT TTGTTGATAG GCAGCGGCCC GATCGTCATC 
GGTCAGGCGT GCGAATTTGA CTACTCGGGC ACGCAGGCGG CAAAGACGCT AAAAGAGCTA 
GGATACCGCG TCGTGCTGAT TAACTCAAAC CCAGCTACCA TCATGACCGA CCCGGACTTT 
GCCGACGCGA CATACATCGA GCCGATCACG ACACAAAGTA TCGAGCGTAT CATCAAAAAA 
GAGTGCGTCG ATGCGATACT GCCGACGATG GGCGGACAGG TCGCGCTAAA TGTCGCCATG 
CAGCTTTACG AGCAAAATTT ACTCGGCGAC GTTAAATTTT TAGGCGCGAA TCCCGAAGCG 
ATAAAAAAGG GTGAGGATAG GCAAATTTTT AAAGCCACGA TGCAGCGTAT CGGCATGGAT 
CTGCCAGAGA GCCGCTATGC CTACAACTTC GACGAGGCGA TCTTCGCGGC AAACGAGATC 
GGCTTTCCGC TCATCATCCG CGCTAGCTAC ACGCTAGGAG GTGCCGGTAG CGGAGTCGCT 
TATAATATGG ACGAATTTCG CGAGCTAGCC GCGGCAGGGC TTGACGCCAG CCCGATACAT 
GAAATTTTGA TCGAGGAGAG CCTGCTAGGC TGGAAAGAAT ACGAAATGGA GGTCATCCGC 
GACCGCAACG ACAACTGCAT AATCGTCTGC TCGATCGAAA ATTTTGACCC CATGGGCGTG 
CATACGGGCG ACTCTATCAC TGTCGCACCA GCGCTTACGC TAACGGACAA AGAGTATCAG 
GCGATGCGCG ATGCGAGTTT TAAAATTTTA CGCGAGATCG GCGTCGATAC GGGCGGCTCA 
AATGTGCAGT TTGCGATAAA TCCAAATAGC GGACGCATGA TCGTGATCGA AATGAACCCG 
CGCGTGAGCC GTAGCTCGGC ACTTGCGAGC AAGGCTACGG GCTATCCGAT AGCAAAGGTC 
GCCACGCTGC TTGCCGTGGG ATTTAGCCTC GATGAGATAA AAAACGACAT CACGGGCACG 
CCGGCTAGCT TCGAGCCTGT CATCGACTAT ATCGTGACCA AAATACCGCG CTTTACATTT 
GAAAAATTCC CGGGCTCAAA TCCATATCTT GGCACGGCGA TGAAGTCCGT GGGCGAGGTG 
ATGGCGATAG GGCGGACGTT TAAAGAGAGC GTGCAAAAGG CGCTTTGCTC GATGGAGCGC 
GACTTGTGCG GATTTAACGC GCTAAATTTA GACGAGAACG CGCTTATTTA CGGGCTGCGA 
AACGCAAACG AATCGCGCAT CCTCTACATC GCACAAGCCT TTCGTGACGG GCTAAGTGTA 
GAACAGGTGC ATGAGTTTAG CAAGATCGAT CCTTGGTTTT TGGATCAAAT TTATCAGATC 
GTGGGGTTTG AAGACAAGAT CGACATGGAC ATCCTAAACG ACGCAAATTT GCTCCGCACC 
GCCAAGACTA TGGGCTTTTC GGACAAGATG ATCGCGGTGC TCATCAACGA AAAAGATAAT 
CTCGAACTTA GCCAAAACGA CATCTATTTC GCGCGCGAAA AGCTTGGCAT AAATTTTGAA 
TACAACGAGG TCGATACGTG TGCGGGCGAA TTTAAAGCCC TCACGCCATA TCTTTACTCC 
ACGACAAACG TCACGAAACT GCCGCGCAAA GAGCAAAATT TAAGCGCAAA CGAGAAAAAG 
GTGATGATCA TCGGCGGCGG ACCAAACCGC ATAGGTCAAG GCATCGAGTT TGACTACTGC 
TGCGTGCATG CTAGCTACGC TCTGCGCGAC ATGGGCGTCA AAACGATAAT GTATAATTGC 
AATCCCGAAA CCGTCAGCAC CGACTACGAC ACGTCCGACG TGCTATATTT TGAGCCAATC 
GACTTCGAGC ATGTGCGCTC GGTCATCGAG CATGAAAGGC CTGATGGGGT GATCGTGCAT 
TTTGGCGGGC AGACGCCATT AAAATTTGCC AAACGGCTCG TGGTCGCGGG TGCGAAGATC 
ATCGGCACGA GTGCGCGCAC GATCGATATC GCCGAAGACC GCAAAAAATT TAGCGAATTT 
ATCTCAAATT TAGGCATCAA GCAGCCCACA AACGACACCG CTACGAGCGA GGACGAAGCC 
CTGAAAAAGG CAGCCGCGAT CGGCTATCCC GTGCTGGTGC GCCCTAGCTA CGTGCTCGGC 
GGTCGCGCGA TGCGCCGCGT GCATAGTGAG GCGGAGCTTA AAGTCTATAT GAACGAAGCG 
GTCAAGGTCA GCAACAACTC CCCCGTGCTG CTTGATAAAT TTTTACAAGA CGCCACCGAG 
CTTGACGTCG ATGCGATAAG CGACGGCAAA GACGTTTATA TCGGTGCGAT AATGGAGCAT 
ATCGAGGAAG CGGGCATCCA CAGCGGCGAT AGCGCGTGCA TCCTGCCGCC CATTAGTCTC 
TCACCCGAGA TGATCGCAAA AGTCGAGGCG CAAACACGCG ACATTGCACT AAATTTAGGC 
GTCGTGGGAC TCATGAATAT CCAGTTTGCT ATCTATGAGA ATGAACTATA CATGATCGAG 
GTAAATCCGC GCGCGAGCCG CACCGTGCCC TTTGTCAGCA AAGCAACGGG CGTGCCGATG 
GCAAAGGTCG CCACGCGCGT GATGTGGCAG GGCGATCTAA AAGAAGCGCT TAAATTTTAC 
GATCAATACG GCGCCCTTGA GCAAGCGGGT GAAATTTTAA AACCTCGCGT GAAAGGTCAC 
GTCTGCGTCA AAGAGGCGGT CTTTCCGTTT AACAAGCTTA GCGGAGCCGA TCTCATCCTT 
GGTCCTGAGA TGAAAAGCAC GGGTGAAGTG ATGGGTATAA GTGCCGATTT TGCAAGCTCG 
TTTGCCAAGT CTCAGATCGC CGCGAGCAAC TGCTTGCCAA CCGGCGGAAA CGTCTTTTTG 
ACGCTAACGG ACGCGGATAA GCCCTATGCC GCGCAGCTAG CAAAGGAACT CATAAATTTA 
GGCTTTAAGA TCGTCGCGAC CGGCGGAACG CATAAAATTT TAAGTGGGAA TGGCGTGGCG 
GCGGAGTTTG TCTATAAGAT CAGCGAAGGA CGCCCAAATA TCGAAGACAG GCTAAAAAAC 
GGCGACATCG CGCTCGTGAT AAACACCAGC GATAGCAAAT CAAGCGTAGA TGACGGCAAG 
AAAATCCGCC AAAACGTGTT GCGATTTAAA ATTCCGTATT TTACCACTAT GCGTGCGGCT 
CTTGCAGCGG CAAGATCGAT AAAAAGCGTG CAAGAAGGAA GCGCGCTGGA AGTAAGAAGT 
TTACAGGAGT ATTTACAGAA ATAA 

 

Protein sequence

MPKRDDIKTI LLIGSGPIVI GQACEFDYSG TQAAKTLKEL GYRVVLINSN PATIMTDPDF 
ADATYIEPIT TQSIERIIKK ECVDAILPTM GGQVALNVAM QLYEQNLLGD VKFLGANPEA 
IKKGEDRQIF KATMQRIGMD LPESRYAYNF DEAIFAANEI GFPLIIRASY TLGGAGSGVA 
YNMDEFRELA AAGLDASPIH EILIEESLLG WKEYEMEVIR DRNDNCIIVC SIENFDPMGV 
HTGDSITVAP ALTLTDKEYQ AMRDASFKIL REIGVDTGGS NVQFAINPNS GRMIVIEMNP 
RVSRSSALAS KATGYPIAKV ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF 
EKFPGSNPYL GTAMKSVGEV MAIGRTFKES VQKALCSMER DLCGFNALNL DENALIYGLR 
NANESRILYI AQAFRDGLSV EQVHEFSKID PWFLDQIYQI VGFEDKIDMD ILNDANLLRT 
AKTMGFSDKM IAVLINEKDN LELSQNDIYF AREKLGINFE YNEVDTCAGE FKALTPYLYS 
TTNVTKLPRK EQNLSANEKK VMIIGGGPNR IGQGIEFDYC CVHASYALRD MGVKTIMYNC 
NPETVSTDYD TSDVLYFEPI DFEHVRSVIE HERPDGVIVH FGGQTPLKFA KRLVVAGAKI 
IGTSARTIDI AEDRKKFSEF ISNLGIKQPT NDTATSEDEA LKKAAAIGYP VLVRPSYVLG 
GRAMRRVHSE AELKVYMNEA VKVSNNSPVL LDKFLQDATE LDVDAISDGK DVYIGAIMEH 
IEEAGIHSGD SACILPPISL SPEMIAKVEA QTRDIALNLG VVGLMNIQFA IYENELYMIE 
VNPRASRTVP FVSKATGVPM AKVATRVMWQ GDLKEALKFY DQYGALEQAG EILKPRVKGH 
VCVKEAVFPF NKLSGADLIL GPEMKSTGEV MGISADFASS FAKSQIAASN CLPTGGNVFL 
TLTDADKPYA AQLAKELINL GFKIVATGGT HKILSGNGVA AEFVYKISEG RPNIEDRLKN 
GDIALVINTS DSKSSVDDGK KIRQNVLRFK IPYFTTMRAA LAAARSIKSV QEGSALEVRS 
LQEYLQK