Gene CCV52592_0683 details

Gene Information

• Locus tag: CCV52592_0683
• ID: 5407324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 1291849
• End bp: 1293777
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640872732
• Product: penicillin-binding protein 1A (PBP-1a) (PBP1a)
• Protein accession: YP_001408549
• Protein GI: 154173954
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0744] Membrane carboxypeptidase (penicillin-binding protein)
• TIGRFAM ID: [TIGR02074] penicillin-binding protein, 1A family

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATA TCTTGGCTTT TTGTTTTGCC GTGGCTATCG CTTTTTGCGG TGCTTTTTTA 
TATTTTTACG CGCAGGTGAG GTTCGAGGCT TACAGCATAA TCGACTACAA ACCGAAGCTA 
ACGACGCAAA TTTTTGACAG AAACAACGAA TTGATCGCAA ATATATTTGA AGAAAACAGA 
ATTTATGTAA GATATAACGA CATCCCCGCG CGAGTCATCG AGGCGCTAGT AGCGATCGAG 
GATACGAGCT ATTTTGAGCA TGGCGGAGCG AACTACGAAG CCATAGCAAG AGCCGTCGTA 
AAAGACATCA AGGCCCAAAA GCTGGTAGAG GGCGCATCTA CTTTGACGCA GCAGCTGGTC 
AAAAATTTAG TCCTTACTCG CGAGAAGAAA TTTACAAGAA AGATCAAAGA GATAGTCCTC 
GCTATCAAGC TTGAAAACGA GCTTTCTAAA GAAGATATCA TAGAAAGATA CCTAAATCAC 
GTCTATTTCG GACATGGCTA CTACGGTATA AAGACGGCTG CCGAGGGATA TTTCAGAAAA 
GAGCTGAACG AGCTTAGCAT AAAAGAGATC GCCATTTTAG TCGGCCTGCC AAAAGCACCT 
AGCACATACG ATCCTACAAA ACACCTTGAC CTCTCGCTAA GCCGCGCGAA CCGCGTGCTC 
GAGCGTATGT ATAACATCGG CTGGATAAAC GAGGACGAAT ACCGAAAAGG CGTGCTGGAA 
GAGCCTGCGG TGTTTGACGA TACGCTCACT AGAAACAAAG CCCCTTACGT AGTCGACGAG 
ATCATCAAAG AGGCCTCTAA AAAATTTGAC GACATAAAAA CTGGCGGATA CCGCATACAA 
AGCACCATCG ATCTTGGCGT GCAAAAAATG GCGCAAGACG CGCTAGTATA TGGATACAAT 
GAAATTTTAA AGCGCGACAA AAAGGCAAAC CCTGAAATGC TAAACGGCGC CATCGTCGTG 
ACCCAGCCTC AAAGCGGGCA TATTTTAGCA CTCATCGGCG GGATAGACTA CGCAAAAAGC 
AGCTACAACC GCGCAACTCA AAGCCAGCGC CAGCCAGGAT CGAGCTTCAA GCCTTTCATA 
TATCAAATAG CCCTTAACAG CGGCTACTCG GTCGTCTCTC AAGTAGCCGA CGTCGCACGC 
ACTTTTGATA TGGGAAATGG CAAGGAGTGG ACGCCTAAGA ACTATAGTGG AGGCTTTCAG 
GGCTACATCA CGATCAAGTC CGCCATCACT CAGTCGCGCA ACCTGGCAAC CATAAATTTA 
CTAAACGACC TTGGCCTCAG CTCGGTTCGT AAGAAGCTGG TCGAAATGGG CTTTGAAAAT 
ATCCCTGAAA ATTTATCCAT CGCACTTGGA AGCTTTGGGA TCTCGCCGCT TGAGTTTGCG 
AAATTTTACT CGATGTTCCC AAATGAAGGC GAGATAGTCG AGCCTACTTT GATAAGACAC 
ATCGAAAACA GCTTTGGAGC GGCGATGGAC TACGAAGGGC AAAAAAAGCA AGTGCTTAAG 
CCCGAGCAGG CATTTTTGAT GACTACTCTG CTTCAAAACG TCGTAAATAA CGGCACCGGA 
CGAAACGCAA AGATACAAGG CATACAAATA GCAGGCAAAA CCGGTACCAC AAATAACAAC 
ATAGACGCGT GGTTTTGCGG ATACACTCCG GACATCGAGG CCATCATCTG GTACGGGAAC 
GACGATAACT CACCGATGAA AAAGATCGAG GGCGGCGGCA GGACGGCGGC GCCGGTATTT 
AAGAAATTTA TGGAAGAGTA TATAAAGCAA TATCCGACGC TCAGACGGGT ATTTGAGCAA 
CCCGAGGGCG TTTATAAGGG CTACTACGAT GGTGGCGACG AGTTTTACAC CAACGACTCG 
CCTTTGCCTC AGATGACACC TCTAAACGAG ATCATTCAAG ATCAGGAGAA CGAAGGTTTG 
ATTTTCTAA 

 

Protein sequence

MKYILAFCFA VAIAFCGAFL YFYAQVRFEA YSIIDYKPKL TTQIFDRNNE LIANIFEENR 
IYVRYNDIPA RVIEALVAIE DTSYFEHGGA NYEAIARAVV KDIKAQKLVE GASTLTQQLV 
KNLVLTREKK FTRKIKEIVL AIKLENELSK EDIIERYLNH VYFGHGYYGI KTAAEGYFRK 
ELNELSIKEI AILVGLPKAP STYDPTKHLD LSLSRANRVL ERMYNIGWIN EDEYRKGVLE 
EPAVFDDTLT RNKAPYVVDE IIKEASKKFD DIKTGGYRIQ STIDLGVQKM AQDALVYGYN 
EILKRDKKAN PEMLNGAIVV TQPQSGHILA LIGGIDYAKS SYNRATQSQR QPGSSFKPFI 
YQIALNSGYS VVSQVADVAR TFDMGNGKEW TPKNYSGGFQ GYITIKSAIT QSRNLATINL 
LNDLGLSSVR KKLVEMGFEN IPENLSIALG SFGISPLEFA KFYSMFPNEG EIVEPTLIRH 
IENSFGAAMD YEGQKKQVLK PEQAFLMTTL LQNVVNNGTG RNAKIQGIQI AGKTGTTNNN 
IDAWFCGYTP DIEAIIWYGN DDNSPMKKIE GGGRTAAPVF KKFMEEYIKQ YPTLRRVFEQ 
PEGVYKGYYD GGDEFYTNDS PLPQMTPLNE IIQDQENEGL IF