| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0571 |
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| Symbol | topA |
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| ID | 5407826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 1729008 |
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| End bp | 1731116 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640873184 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001408974 |
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| Protein GI | 154175095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATC TAATCATTGT AGAGTCGCCT GCAAAAGCAC GAACTATCAA GAATTTCCTA
AGCAAAAACT ACGATGTCAT CGCATCTAAA GGGCACATAA GAGACCTGCC TAAAACCAGC
TTTGGCATAA AGATCGAGGA TGATAAATTC ACGCCAGAAT ACCGCGTGAG CCTGGATCAT
TCAAAGATAG TAAAAGAGAT AAAAGAGCTA GCCAAGGGTG CAAACGAAAT TTACCTCGCG
ACCGATGAGG ATAGAGAGGG AGAGGCGATA GCGTTTCACA TCGCAAACGC CATCGGTAAA
GAGGTCTCCG CGCTGCCTCG CATAGTCTTT CACGAGATAA CAAAGACCGC CATCGACAAT
GCCTTAAAAC ATCCGCGAAA GATCGATATG AACAGCGTAA ATGCGCAGCA AGCGCGTAGA
TTGCTCGATC GTATCGTAGG CTACAAGCTA AGCCCTCTTT TAAATTTAAA GATACAAAAG
GGCCTAAGCG CAGGACGCGT GCAAAGCGCC GCACTAAAGA TCATCGTCGA TCGTGAGCGC
GAGATCATAG CGTTTAAGCC GGTCGAGTAT TACAGTATCG ATACGAAATT TAAAACCGAT
CTTGACGCCG AGCTGGTAAA ATTTGAAGGC AAAAAGATAG AAAAGCTCAC TATTACAAAC
GCCGATCGCG CCAGATACAT CGTAGATGCC CTAAAAAACG AGAAATTCAG CGTCCGCGAG
ATAGAGAGCA AGGATAGAAA GATCCAGCCA AGCCCGCCCT TCATGACCTC TACGCTTCAG
CAAAGCGCCT CAAACCGCCT GGGCTTTAGC CCTAAAAAGA CGATGATGCT GGCTCAAACG
CTTTATGAGG GCGTGCAGAC GCACGAGGGC TTCATGGGCG CGATAACATA TATGAGGACG
GACAGCCTAA ATTTAGCCAA AGAGGCGGTC GAGGCCGCAC GCGAGCTGAT AAAAAACGAG
TTTGGCAAAG ACTATCTACC GCCAAAAGCC GTGCACTACG CGACCAGCTC AAAGGGCGCG
CAAGAGGCGC ACGAAGCCAT ACGCCCGACA AATCTAAATT TCACGCCCGA GATCGCGGCG
AAATTTTTAC AAAAAGATGA GCTGCGCCTT TATACTTTGA TATACAATAG ATTTTTAGCA
TGTCAGATGA GCGCGTGCGT GAGCCAAACG CAAAATTTAT TCGTCGTAAG CGATAATGGC
GAGTTTAAGA TAAGCGGCAG AAAGGTGCTA TTTGACGGCT TTTACCGCGT TTATGGCGAT
ATGGATAAGG ATAAAATTTT ACCAAATCTA AACGTAGGCG ATGAGATGAA GCTTGAAAGC
ATCAAAGAAA GCCAGCATTT CACCGAGCCG CCTGCTCGCT ACTCGGAGGC CGGACTTGTC
AAAAAGCTAG AAAGCCTTGG CATAGGACGT CCTAGCACCT ACGCCCCTAC GATCTCACTA
CTGACCTCTC GCGAATACGT CAGGGTCGAG AAAAAGCAGC TCATACCAAA CGACGTCGCC
TTTAGCATGA TAGGCGTTTT GGAGGAGCAT TTTAATGATA TCGTAGATAG CGAATTTACC
TCGCATCTTG AAGAGAAGCT CGACCTCATC GCCGAGGACA AGGCCGACTG GCAAAAGGTA
CTGAGCGAAT TTTACTATCC TTTCATGGAT AAAATTTCAG AAGGCAAAAC GGGCATCAAA
AGCCTCAAAG TCGCCACTCC GATCGGTGAG AAATGCCCGC AGTGTGGCGG CGAGCTGGTA
AAAAGAAAGG GTAGATACGG CGAATTCATC GCATGTAGCA ATTTCCCGAA GTGTAAATAC
TCACGCAACA TCGCAAGCCA AGCAAACGAC GCAGGCGCGC AAACGACCGA GCCAAAAGCA
AAAAAAGAGC TGGTAAAGCT GGACGTACCA TGTCCAAAAT GCGGCGGCGT CATCGTGGAA
AGGTTTAGCA GACGCGGGAA ATTTTACGGA TGTGCCAACT ATCCAAAGTG CGACTTTATC
AGCAACTACG AGCCTACCGA GCATAAATGT AGCGAATGCG GGTCGATGAT GGTAAAAAAA
GAGCTCAAAA AAGGGACGTT TTTAGAGTGC ACGAAGTGCA AGCACAAAGT CCAGATAGGC
GAGAACTAA
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| Protein sequence | MKDLIIVESP AKARTIKNFL SKNYDVIASK GHIRDLPKTS FGIKIEDDKF TPEYRVSLDH
SKIVKEIKEL AKGANEIYLA TDEDREGEAI AFHIANAIGK EVSALPRIVF HEITKTAIDN
ALKHPRKIDM NSVNAQQARR LLDRIVGYKL SPLLNLKIQK GLSAGRVQSA ALKIIVDRER
EIIAFKPVEY YSIDTKFKTD LDAELVKFEG KKIEKLTITN ADRARYIVDA LKNEKFSVRE
IESKDRKIQP SPPFMTSTLQ QSASNRLGFS PKKTMMLAQT LYEGVQTHEG FMGAITYMRT
DSLNLAKEAV EAARELIKNE FGKDYLPPKA VHYATSSKGA QEAHEAIRPT NLNFTPEIAA
KFLQKDELRL YTLIYNRFLA CQMSACVSQT QNLFVVSDNG EFKISGRKVL FDGFYRVYGD
MDKDKILPNL NVGDEMKLES IKESQHFTEP PARYSEAGLV KKLESLGIGR PSTYAPTISL
LTSREYVRVE KKQLIPNDVA FSMIGVLEEH FNDIVDSEFT SHLEEKLDLI AEDKADWQKV
LSEFYYPFMD KISEGKTGIK SLKVATPIGE KCPQCGGELV KRKGRYGEFI ACSNFPKCKY
SRNIASQAND AGAQTTEPKA KKELVKLDVP CPKCGGVIVE RFSRRGKFYG CANYPKCDFI
SNYEPTEHKC SECGSMMVKK ELKKGTFLEC TKCKHKVQIG EN
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