Gene CCV52592_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0079 
Symbol 
ID5407202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand+ 
Start bp1193857 
End bp1194549 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID640872638 
Productzinc metalloprotease 
Protein accessionYP_001408455 
Protein GI154174637 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0200194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCGGTT TTAAATTCAT ACAAAAACAA AAGCCGCCAA AACCCGTCAG CAAAAAGGTG 
CAGGTAAATT TTAACGGACT GGCGGTGGCG CTAAATTTTA AAAAGGGAGT GAAAAGCTTT 
CGGCTAAAAG TGGCAAAAAG TGGCGATATT TCGCTCTCGC TACCATTTTA TGCCACGCAA 
AAATCGGGCT TTGAGTTTTT GGCTAAGCAC GCGGGCTGGC TGGCTACGAC GCATGCAAAA 
ATTTTGGCGA ATTTACCAAA AGAGGACGAA TTTAGACTGC TTGGTAAAAT TTATCGCATT 
AAAATAGACG CAAATTTAAA GGATGTAAAT TTGACCAAAT TTGACGGCGA GATCCACGCG 
CCAAATTTCA AAGCGCTTGA AATTTACAAA AAAACCGTAG CAAAGCAAAT TTTTACCGAA 
TTTATCGATA AATTTACACC TGTCATCAAC CGTAAGATAA ATCGCCTCAC GATCCGCAAA 
ATGCAGACTC GCTGGGGTAG CTGCAATCAC AAAAAAGGCT ATATAAACCT CAGCCTAAAC 
CTCATCGAAA AAGCTCCCGA ACTAGTCGAA TACGTCGTGC TGCACGAGAT GACGCATCTC 
ATTTTCCCAC ATCATCAAAA GAGCTTTTAT GAATTTCTAG CGGGCATCAT GCCAGATCAC 
AAGGCAAGAG AGCTCGCACT AAACGGCAAA TAG
 
Protein sequence
MFGFKFIQKQ KPPKPVSKKV QVNFNGLAVA LNFKKGVKSF RLKVAKSGDI SLSLPFYATQ 
KSGFEFLAKH AGWLATTHAK ILANLPKEDE FRLLGKIYRI KIDANLKDVN LTKFDGEIHA 
PNFKALEIYK KTVAKQIFTE FIDKFTPVIN RKINRLTIRK MQTRWGSCNH KKGYINLSLN 
LIEKAPELVE YVVLHEMTHL IFPHHQKSFY EFLAGIMPDH KARELALNGK