Gene CHAB381_1790 details

Gene Information

• Locus tag: CHAB381_1790
• Symbol: lspA
• ID: 5409299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1708478
• End bp: 1708960
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640871456
• Product: lipoprotein signal peptidase
• Protein accession: YP_001407300
• Protein GI: 154149360
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.434015
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT TTTTTAAAAG TTCAAATTTC AAGATTGCGT TGCTTAAATT TTGCCTGTTT 
TTTGTCGGAA TTTTAGCAGC CGATCAAGCA ATAAAAGCCG TTTTCTTAGA CGGCTTTCAC 
TTTGAGGGAG AGTTTATTTC ACTGATTCTC ACATTTAATA AAGGTGTCGC TTTTTCGATG 
TTTGCCTTTT TGGGTGAAAA TTTGAAATTT ATCCAAATTG TCATAATATT AGGACTTTTA 
ACATATCTTT TTTATGAGAA AAAACTCTTT TTAAATCACG CAGTCGAGTT CGGAATTTTA 
GCAGGAGCCG GCTTTTCAAA TATAATTGAT CGCTTTATTC ACGGCGGCGT CGTAGATTAC 
GTTTTCTGGC ATAAATGGTT TGAATTCGCA GTTTTTAATT TTGCTGATGT GATGATTGAT 
TTTGCGGTTG TAACTTTAAT AATTCGCATG ATGTTCGACA AAAATTTAAA AGGTAAAAAA 
TGA 

 

Protein sequence

MTDFFKSSNF KIALLKFCLF FVGILAADQA IKAVFLDGFH FEGEFISLIL TFNKGVAFSM 
FAFLGENLKF IQIVIILGLL TYLFYEKKLF LNHAVEFGIL AGAGFSNIID RFIHGGVVDY 
VFWHKWFEFA VFNFADVMID FAVVTLIIRM MFDKNLKGKK