Gene CHAB381_1757 details

Gene Information

• Locus tag: CHAB381_1757
• Symbol: typA
• ID: 5408846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: -
• Start bp: 1678146
• End bp: 1679954
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640871424
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_001407268
• Protein GI: 154148859
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAAAATA TACGAAATAT TGCAGTTATT GCGCACGTAG ATCACGGAAA AACGACAATT 
GTAGACCAAC TTTTAAAGCA ATCAGGAACT TTTAATGATC ACGAAGTCGT AGGCGATCGC 
GTGATGGATA GTAACGATAT AGAAAAAGAG CGTGGAATTA CTATTTTATC AAAAAATACT 
GCCATTAATT ATAATGGCGT TAAAATCAAT ATCATAGATA CTCCGGGTCA CGCCGATTTT 
GGCGGAGAAG TAGAACGCGT GCTAAAAATG GTTGATGGCG TTTTGCTTTT GGTTGACGCA 
CAGGAAGGCG TAATGCCTCA AACTAAATTC GTCGTTAAAA AGGCGCTTTC TTTAGGTTTG 
CGTCCGATTG TCGTAATAAA TAAGATTGAT AAACCGGCTG CAAATCCTGA CAAAGTAATA 
AATGAAATTT TTGATCTTTT TGTAGCGCTT GGCGCAAATG ATGAACAACT TGATTTTCCG 
GTTATTTATG CGGCTGCAAA AAACGGTTAT GCAAAATATG CTTTAGACGA TACAAATAAC 
GATATGAAAC CGTTATTTGA GACTATTATA GCCCATGTGC CAAGTCCTAG CGGAAAAGAT 
GAAAATCCTT TGCAACTTCA AGTTTTTACG CTTGATTATG ACAATTATGT AGGTAAAATC 
GGCATTGCAA GAATTTTTAA CGGCAAAATT TCAAAAAATC AGAATGTAAT GCTTATAAAA 
GCCGACGGCA CAAGACAAAC CGGAAGAATC AGTAAGCTTA TCGGCTTTTT GGGACTTCAA 
AGACGTGAAA TAAACGAAGC AGGAGTTGGT GACATCGTAG CAATTGCCGG ATTTGATGCG 
CTTGATGTAG GAGACAGTAT AGTAGATCCA GCACATCCTA AACCGCTTGA AGCTTTGCAT 
ATCGAAGAAC CGACTTTAAG CGTAATTTTT AGCGTAAATG ATGGACCTTT GGCAGGAACG 
GAAGGAAAAT TTGTAACTTC AAATAAAATT GACGAACGTT TGGAAAACGA AATGAAAACA 
AATATTGCCA TGCGTTATGA AAATGTAGGA GAAGGAAAAT TTAAAGTAAG CGGCAGAGGC 
GAACTTCAAA TTACAATCTT AGCTGAAAAT ATGCGTAGGG AGGGCTTTGA ATTTTGTCTT 
GGAAGACCCG AAGTTATTGT AAAAGAAATA AATGGCGTAA AATGTGAACC TTTTGAGCAT 
TTGGTTATTG ACGCGCCTGA TGAGTGTACC GGAGTTGTTA TTGAAAAGCT TGGTAAACGC 
AAAGCCGAAA TGAAAACAAT GGTTCCTACG GGTGATGGCC AAACACGCCT TGAGTTTGAG 
ATTCCGGCGC GCGGATTAAT AGGCTTCAGG TCTCAATTTA TGACGGATAC AAAAGGCGAG 
GGCATTATGA ATCATAGCTT TTTGGAATTT CGTCCTATGA TAGGAAATGT CGAGCATAGA 
ACAAACGGTT CATTGGTAAG TATGGAAAAC GGTGTTGCGC TTGCTTATTC TCTTTGGAAT 
CTGCAAGATC GCGGAGTTCT TTTCATAGCA CCACAAGCTA AGGTTTATAT AGGTATGATA 
ATTGGTGAGC ATAGTAGACC GAACGATTTG GACGTAAATC CTATCAAAGG CAAAAATCTT 
ACAAATGTCA GAGCTAGCGG AAGTGATGAC GCGATAAAAT TGGTTCCGCC AAGAATTTTA 
AATTTGGAGC GAGCGCTTGA ATGGATTGAA GAAGACGAGC TTGTTGAGGT TACGCCGCAA 
AATATTCGTG TTAGAAAGCG CTATTTGGAT CCTATTACAC GCCGTAGAAT GGCAAATAAA 
ACAAAATAA 

 

Protein sequence

MENIRNIAVI AHVDHGKTTI VDQLLKQSGT FNDHEVVGDR VMDSNDIEKE RGITILSKNT 
AINYNGVKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL 
RPIVVINKID KPAANPDKVI NEIFDLFVAL GANDEQLDFP VIYAAAKNGY AKYALDDTNN 
DMKPLFETII AHVPSPSGKD ENPLQLQVFT LDYDNYVGKI GIARIFNGKI SKNQNVMLIK 
ADGTRQTGRI SKLIGFLGLQ RREINEAGVG DIVAIAGFDA LDVGDSIVDP AHPKPLEALH 
IEEPTLSVIF SVNDGPLAGT EGKFVTSNKI DERLENEMKT NIAMRYENVG EGKFKVSGRG 
ELQITILAEN MRREGFEFCL GRPEVIVKEI NGVKCEPFEH LVIDAPDECT GVVIEKLGKR 
KAEMKTMVPT GDGQTRLEFE IPARGLIGFR SQFMTDTKGE GIMNHSFLEF RPMIGNVEHR 
TNGSLVSMEN GVALAYSLWN LQDRGVLFIA PQAKVYIGMI IGEHSRPNDL DVNPIKGKNL 
TNVRASGSDD AIKLVPPRIL NLERALEWIE EDELVEVTPQ NIRVRKRYLD PITRRRMANK 
TK