| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1750 |
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| Symbol | |
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| ID | 5408972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 1673281 |
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| End bp | 1674042 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640871418 |
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| Product | RNA pseudouridine synthase |
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| Protein accession | YP_001407262 |
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| Protein GI | 154147941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGA ATAAATTTAT TTCCCACAAT ACCGGCTATT CAAGGCGTGA AGCGGATGAG
CTGATAAAAA ATGGAAAAGT CAGTGTAAAC GGACGTATTA TCAGTGATTT TATAGAAATT
AACGAAAGTG ATAAAATACG CATAAACAAG CATTTGATAA AGCTCAAAAA AGATTTTACA
ATGATTATTT ATAACAAACC AAAAGGCGAG TTAGTTAGTA AAAAAGATGA CAGAGGAAGA
AAAACAATTT ACGATTCTTT ACCGAAAGGA TTTTCAAAAT TTGTAAGTAT CGGGCGATTG
GATTATGCAA GTGAAGGACT TTTGCTTTTG ACAGATGCGC CGGCAATTGC GACTGCTTTA
ATGCAAAGCA ATATAGAAAG AGAGTATTAT CTTAAAGTAA AAGGCGAAAT TACAGATGAA
ATTAAAACCG CTATGAAAGA TGGATTTTTT GCAAAAGATG CCACAAAAGG CGCTCATCCT
AAAACAGAGA TAAAATCAAT GAATTTTGCA CCATTCGTAG CTTTTGATAT TTTTGGAAGC
AGCGGCGGAT ATACAAAACT TCGCGTTTTA ATCAAAGAGG GACAAAACCG CGAACTTCGC
CGATTTTTTG GATATTTTGA TTTGGAAGTT ATGGACTTAA AACGTGTCAG TTTTGGAATA
ATAGATCTTG GAATGTTAAA AGAAAGCAAA TGGAGATATT TTACAAATAG TGAATATGAA
GAATTAAGGG GCTTTTTAAA AGAAAATAAT ATCAAATACT AG
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| Protein sequence | MRLNKFISHN TGYSRREADE LIKNGKVSVN GRIISDFIEI NESDKIRINK HLIKLKKDFT
MIIYNKPKGE LVSKKDDRGR KTIYDSLPKG FSKFVSIGRL DYASEGLLLL TDAPAIATAL
MQSNIEREYY LKVKGEITDE IKTAMKDGFF AKDATKGAHP KTEIKSMNFA PFVAFDIFGS
SGGYTKLRVL IKEGQNRELR RFFGYFDLEV MDLKRVSFGI IDLGMLKESK WRYFTNSEYE
ELRGFLKENN IKY
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